Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0967 ATGGACACTTTCTACCACCACTTTGACAACACCGATGCCCATTTGCCACCTGGCTTTCGGTTCCATCCTACAGATGAGGAGCTCATCACCTACTACCTTGTCAAGAAGGTTCTTGACAACACCTTCACCGGAAGAGCCATAGCTGAAGTTGACCTCAATAAGTGTGAGCCATGGGAACTTCCTGAGAAAGCCAAGATGGGTGAGAAGGAGTGGTACTTCTTCAGCTTGAGGGACAGGAAGTACCCAACTGGGTTGAGGACCAATAGGGCCACTGAAGCTGGCTACTGGAAAGCCACTGGGAAAGATAGAGAGATTTACAGCTCCAAGTCTTGTTCCTTGGTTGGCATGAAGAAGACACTGGTCTTCTACAGAGGGAGAGCTCCCAAGGGAGAGAAGAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATATGCTTACCATTACCTCTCTAGGAGCTCCAAGGACGAGTGGGTTATATCCCGTGTGTTCCAGAAGACCACCACCGGCAGCGGCGGCGGAGGATCCGTGTCAGCCACCGCAGGCGGCGGCGGTTCCAAAAAAACAAGAATGAGCACCGCCACAACAAACTCAACCACCACAGTGAGCCTCTGCCCTGAACCAAGTTCTCCCTCTTCGGTTTACCTTCCACCCCTTCTCGACTCATCACCGTACAGCACAACCGCCGGCTCCGCCGCTGCATACGGCGGCGGAGGCCAGGGCTGTTCCTACGACAGCACCAACACCACCAACACAAAGGAGCACGTGTCCTGTTTCTCCACAATCTCCAACAGCTTCGCCAATGGGGTCTTCGATCTTGCTCCTATGGATTCATTTGCTCGGTTCCAGAGGAACAACAACAACAACAACGTTGGTGTCTCTGCTTTCCCTAGCCTGAGGTCACTCCAAGACAACCTTAACATGCCTTTCTTTTTCTCTCCGGCGGCGGCGGTGGCTCAGCCCCTCCACGGCGGCGACTTTGCTGCCGCCGGGAGCTGGCCGGTGGCGGAGGATCAGAAGGTCGCAGACGGCGGCGCCGGCATGGCGTTGGGAGCTTCCGAGCTTGATTGCATGTGGGGCTATTGA 1089 0.5491 MDTFYHHFDNTDAHLPPGFRFHPTDEELITYYLVKKVLDNTFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKSCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKYAYHYLSRSSKDEWVISRVFQKTTTGSGGGGSVSATAGGGGSKKTRMSTATTNSTTTVSLCPEPSSPSSVYLPPLLDSSPYSTTAGSAAAYGGGGQGCSYDSTNTTNTKEHVSCFSTISNSFANGVFDLAPMDSFARFQRNNNNNNVGVSAFPSLRSLQDNLNMPFFFSPAAAVAQPLHGGDFAAAGSWPVAEDQKVADGGAGMALGASELDCMWGY* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0967 362 MobiDBLite consensus disorder prediction 169 210 - -
Dod10g0967 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 6 359 - -
Dod10g0967 362 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Dod10g0967 362 SUPERFAMILY NAC domain 12 167 IPR036093 GO:0003677|GO:0006355
Dod10g0967 362 ProSiteProfiles NAC domain profile. 15 167 IPR003441 GO:0003677|GO:0006355
Dod10g0967 362 Gene3D NAC domain 24 171 IPR036093 GO:0003677|GO:0006355
Dod10g0967 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0967 Dod-Chr10 27644053 27645991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0967 1 362 NAC Transcription Factor Family AT5G53950 51.880 1.44e-118 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g0967 NAM 1.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0967 - - gmx:100788671 456.062