Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0965 ATGGCTCCGAGAGACAGAGCAACCGCACTCACGGGGCCGAACCCGACCGTACACAACTCGAAGGAGATCCGTTACAGGGGCGTGAGGAAGCGGCCGTGGGGCCGTTACGCCGCCGAGATCCGCGACCCAGGGAAGAAAACGCGCGTGTGGCTCGGCACCTTCGACACCGCCGAGGAGGCGGCGCGAGCATACGACTCGGCGGCGCGCGAGTTCCGCGGCGCCAAGGCCAAGACCAATTTTCCAACCCCCTCGGAGCTCCTCAACAACAACCTCGTCAACAACAATAACAACATCAACGCGCGTAGCCCTAGTCAGAGCAGCACGCTCGACTCTTCCTCTCCGCCGCCACCGCCTCCGCCTCATCTGGACCTCACGTTGTCGCCGTTCTCCGCCACCATGGCATTCCCGGTGGCGCGTCCCGTTTTGTTCTTCGATGCGTTCGCGCGTGGCGAGGGCGTAGGCCGCCGCGAGGCATGCGGGTTCGATCGCCCTACGGCGTTGGCGTTCCGCGGCAGCGCGTGCAGTGACTCCGGTTCTTCCTCCGTCGTGGACTACGAGGGCGTACCACCGCGCCGGGGACTCTTGGATCTCGATCTGAACGTGCCTCCTCCGGCGGAGGTTGCGTGA 627 0.6539 MAPRDRATALTGPNPTVHNSKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDSAAREFRGAKAKTNFPTPSELLNNNLVNNNNNINARSPSQSSTLDSSSPPPPPPPHLDLTLSPFSATMAFPVARPVLFFDAFARGEGVGRREACGFDRPTALAFRGSACSDSGSSSVVDYEGVPPRRGLLDLDLNVPPPAEVA* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0965 208 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Dod10g0965 208 MobiDBLite consensus disorder prediction 92 109 - -
Dod10g0965 208 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Dod10g0965 208 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 10 198 - -
Dod10g0965 208 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Dod10g0965 208 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Dod10g0965 208 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Dod10g0965 208 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Dod10g0965 208 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Dod10g0965 208 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Dod10g0965 208 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 10 198 - -
Dod10g0965 208 MobiDBLite consensus disorder prediction 1 23 - -
Dod10g0965 208 MobiDBLite consensus disorder prediction 92 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0965 Dod-Chr10 27614320 27615886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0965 14 170 AP2-EREBP Transcription Factor Family AT3G15210 58.333 1.54e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod10g0965 AP2 3.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0965 K09286 - gmx:100813652 226.868