Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0960 ATGAGATTATCATCTGCACCCGGCTCTTCGTTGGAGCGTAGGACTGCTGGCAAATCGGTTAAGAATGCTGGTAAATCGGGTTCGTGGCTTCGGAAGAAGCACAAGAGGTTGGATGCGATATGTGAGGATGAGTACAATAGAAATCATGGTGAATTCAATGAGTGTGATGATGCTGCAGGTGCAGGGGTTCGCCGGAGCTCCCGGGTTAGGCGTGCCCCGGTTGTGCTTGATGCCTCCCCCGCTCCACCGAAGAAGCGGCGGAGGTTAGGGAAGGATGGAATGGCAACAGGGCATGTGAAGGGTGTCAAGGAGAGGTTACAGCAGGGAAGCCGGAATTCCAGCGGCAGCTGCGATGTGGAGAGTCCGGGGACTTGGAGCTCGAGGTTGAGATCGAGGGTTAGTAGGAGGAATGTAGGTTTTGGGGTGAAGAAGGAGAGAGAATCGCCCCGTGGGAAAAGGAAGCTGTTTGAGAGTGTAGTTAGAAGTGGGGGTAACAGGGATTTGGAGGTTGATGAGAAGGAGGAATTGGAAGGGGGGATGCCGAGAATTGTTAAGTCGAAGAGACCTGGGAGGATCAAAGCGACAAAACATGAAGAAGGGGTTAAAGAGAATGAATCTAATCAAGAAGGGCATAAAGGGAATGAAGCTCATGAAGAAGGGCACAAAGAGAATGGATCTCATGAAGAAGGGCATGAAGAGAGTGGATCTCATGAAGAAGGGCAACAAGAGAGTGAATCTCATGAAGACGGGCATGAAGAGAATGAGTCTCATGAGGAAGGGCATGAAGAGAATGAGTCTCATCAAGAGCATAGAGAGATTGAATATCATGGGAGCTCAGATGAGAGTAAGAGTCAAGAAGTGGAACATATGTCGGACAAAGATGAGGAGAGTGGTTTGGTTCCGGAAATTGATGTGTCTAGAAGGAATATAGTAGATTTATTGGATGAAAATGCCCCTTCTGTGATGGGGAATGGGGAGAGAAACATGTCAAGCAATTTGCAAGCAGAGGAGTGTAATGGCGGCATTGCAGGGGCTCTGGTGGAACATGTAGAGAAAGAGGATGATCAGTTAGAGTGTGTGAAGGAAGGCAATAATGCAAGCGATGCAGTTGAAGTTGCTGGAATCTCAATGATGCAAGTAGAAATTGAAGGATCAGTTGATAAGGAGGTTGAGATTGATGACAATGCCTTGAAAGATGCAAACATTGTGACAAAGGATAAGCCAAAACAAGATTCAAATAGTACACCTGGCCACCAACGAATCAAAGAGGGCAGACGGTGTGGTTTGTGTGGTGGAGGGACTGATGGTAAGCCCCCAAAAAGGTTACTTCAGGATAACGGTGAGAGTGAGGATGAAGCATATAGTGGGTCTTCAGCTTCGGAGGAGCCTAATTATGATATCTGGGATGGTTTCAGTGATGAACCTGGCTGGCTTGGGCATCTGTTGGGTCCTATTAATGATAACTATGGTATTGCTCGAATATGGGTTCATCAGCAATGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGATGCTTAAAGAATGTGAGGGCGGCACTCTGCAGAGGAAGAGCATTGAAGTGCACACGTTGCGGGAGGCGGGGGGCAACCTCTGGTTGTCGTGTTGATCGTTGTCCAAAAACTTATCACTTGCCTTGTGCAAGAGCAAGTGGTTGCATCTTTGATCACCGTAAATTTCTTATAGCCTGCACAGATCATCGGCATCTCTTCGAACCTCATGGTGATAAATATTTAGCCCGGATAAAGAAGTTGAGGGCTAGGAAAATGAAGTGGGAGATGAGGAAGCATTCTAATGAAGCTTGGAGAAGGGATATTACTGCAGAAGAGAGATGGCTTGAAAATTGCGGTGAAGATGAGGAGTTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCACCAGTTTACATTGGTGGTTCGGACTCTGCCAGTGAACCAACCTGTCAGGGATGGGAATCTGTTGCCGGGCTTAAAGGTGTCATCCAGTGTATGAAAGAAGTTGTTATTTTGCCTCTACTATATCCTGAGCTCTTTGATAATTTAGGGCTTACACCTCCGAGAGGTGTTCTTTTGCATGGGTATCCTGGAACAGGGAAAACCTTAGTGGTCCGGGCTTTGATAGGTGCATGTGCTCGTGGTGATAAACGGATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATATGTGGGTGATGCTGAGCGCCAACTAAGACTATTATTTCAGGTTGCTGAGAAATGTCAACCCTCTATAATATTCTTTGATGAGATAGATGGACTGGCACCCTGCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTATCAACATTGCTTGCCCTTATGGATGGTTTGAAATCTCGGGGTTCAGTTGTAGTTATAGGGGCAACAAACCGTCCTGAAGCTGTTGATCCAGCGCTTAGGCGCCCTGGAAGATTTGATCGGGAAATTTATTTTCCATTGCCATCAATTGAGGACAGAGCTTCTATTCTCTCACTTCACACTCAGAGGTGGCCAAAACCAATTACTGGATCCTTGCTTGAGTGGATTGCAAGAAAAACTCCTGGCTATGCTGGTGCTGATCTCCAGGCTCTTTGTACTCAAGCGGCTATCAATGCTTTGAAGAGGAATTTCCCTTTGCAAGAAGTGATGTCTTTAGCTGAAGAAAAACATTCTGGTTGGAAACACCTTCCTCTTCCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCATTTTCACGTTCCCCACTACCGTGCTCCCGAAGAGAAGCTGGAAATGCTGCTAACGATGTAGCATCCTCTCCTCTTCCCATCCACCTAATTCCTTGTTTACTAGGGCCATTGTGCTCACTTCTTGTATCTCTTTGTTTTGATGAACTTCCATGGTTGCCACCTCCTTTATTTAAAGCAGTAACAGTGATTAAGAATGAAATGGTTTCTGCTCTAGAAAAAAGGAAAATGCCTATTGATCACTGGTGGCTGCATGTTGATGATTTTCTTCAAGAGTCAAATATTGCTTCTGAGGTAAAGAGGAAGCTTGCTTGTTTGGGCATTTTATCTGCGAACGATGTCTTTGCTGGTTCTTCTGATATTATGGATGATAAAGATGACAACAGGGTGAAGTTTGTGCCCTCTATAAACAACCATCTTGGCATGCATAGTGGTTTATTTCCGGACAAGTCTTTTGCATTTACTAACAAATCAGGATTTCGGATATTGATTTCTGGAAGTCCGCAATCTGGCCAGAGACATCTTGCTTCCTGTGTTCTTTACTGCTTTGTGGGGAATATTGAAATGCAGAAGATTGATATGGCAACTATGTCACAAGAAGGACATGGAGATGTAGTGCAAGGGATTGCACAAATATTAATGAAATGTGCTAGTGTACACTCGTGCATATTATTCATGCCAAGAATTGATTTGTGGGCTGCTGAGAAACATTTCCAAGTTTCTGAAGAGACTGATTCCTTCTCAATAAATCATTTATCAAAGGCAAGCCAAGTTGTTGAGAAAGAAAGCGAGTTCAATACTGAGAAAAACTCAGCAGAGATAACGAAAGGCCAAGTCGACAAAAAGGCTTCACATGCCTGGATGTCATTTACTGAGCAAGTGGAGTCCATTGGTGTATCCACATCCTTGATGATTCTGGCTACTTCAGAAGTTCCCTATTCAGAACTTCCACGCAAAATAAGGGAATTCTTCCAGAGTTATCTGTCTAAAGACAGCCAATCAACTCCTTTGGAGCAAACAGTTCCTCGGTTCTCACTGCAGCTTGATGGTAATTTTGATCGTGACATGATGGTGAATCTATCTGTAAAAGAGCTATTGAGAAATGTAGTTGAGCAGCAGGTTCAATTCATTCATCAGAGATCTCATGTTCATGTGGGTGTCCAAAAGGGCCACAGAATCTATGATTCAATCGAAGTTTGTAAAGATAAGGTATCAGCTGATGAGAAGAAGGGTGAAATCCAACTTCCTAAATCCTTAACCAAAGTTCCACCGCCACCCAACAGTAGGTCTCTGAAGGAAAAGTCAACCCTGTTGTTGGCAATATGTACATTTGGTTATCAAATTCTCCTATTCCCGCATTTTGCTGAACTTTGTTGGGTCACATCAAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGACCTTGGAGGGGCTGGCCTTTCAACTCCTGTGTAATTCGTCCTAGTAATGCACTAGACAATTTGGCGGTTTCTTGTGGCTCTGGCGGTATTAAAAGCAAAGAAAGGTCTGGTGTGGTCAGAGGCTTGATTGCTGTTGGTTTATCAGCATACAGGGGTGTTTATAAGTCAGCCAGGGAAGTTTCTTATGATGTAAGAAAGGTTCTTGAGATCTTAATTGAGAAAATCAATGCAAAAATTCAAGCTGGGAAGGACAGATATCAATATCTTCGTATTTTATCTCAAGTCGCATGTTTGGAAGATATAGTCAACAACTGGGCTTATGCATTGCTGAGTCTGGAGCAGGATTCTTCGGAGCTTGTACCAAAGGTCATGCCAGCAAGTGTTAGTTCATTAAATGGCCATCCCTCATGTGAAGATCACCAAGCTGGAGGTGAGGATTACCGTTTGGTTGTTCCTATGAATTGCGATGATTCAGAGACACCAGAGACAAACTGTAAGGGAATTTCTGCTGAAACAACTGGATCTCTTGCCTTGAATGAGAAAAATGATAATACAGATAATCTTGATCATGATGGAAGAAATACAAGCTCAAAAGGAGCTCTACAGAACCATTCTTCTTCAGATAAGCATTCTAACAATTCTGTTGATGCAAACCCACCCGTTGATCCATCCCTGAATCAGGAGAATGGAATGCCATCTGGAGTATCTGAATCAGTAACTGCCGGAAATGATGTGCCAGCGGGTAGAGAAGTTCGGATGTCCGAAGACTTGAATAATTCCACATGCACTGACACTGCTGTCCTTCCTGAAAATGGGCTTGACACTGCCTTTGAGCAAGTGGGTGTTGAGAGACGTAACTTCAATACAGTCTCTAATCAGCCTCTTAGCATGTCCCCAGCAGATACTGGTGTTAAATTAAGTCATGTTAGCTCTGATAAACCTGAGAATGCTATAGATACTAATCTCTCTTCGAGTAACGACTGTGGTGATACTGAATCTGCTGTAATTTGCATGTATCAATGTTGCCCTGGATGTCTTAACAGTCTCTATGATGTGACACACAAACTACTTGCTTGCGAGTTGAGCAACAGCCATTGGACAATAGAAGATGTCCATGATGCTGTTTCATCATTATCTGTGGATCTAATTTCAGCGGTTAGAAAATGTCACATGGAAGAAGGTTTCAGTGATTTATCTGAAAGAACCTCTAGACATGAAAAATACGGAACATCTTTGAACCTGAAAACATGTGACCCCAGAAACCAAGGCAAGGACTTTGTGCCAGGTGAGTGTGTTTCTCACTCAACAAGCCAGCATGCAACTGCAAGCAAAGATAAGGTACTGAATGAATCACTGAAACTTGATTTCAAGTTTATATTCAGAGATGGTGTGCTGGTTCCTTTGGACCCGGACAGGGATGTTTCTTTTCACTGTAAATTTGAGAGCTTGTGCCTTTGTTCTGTTAAAGAGTTGATAGTAGTGACAAAGCGCCCTTTTGGTTAA 5706 0.4387 MRLSSAPGSSLERRTAGKSVKNAGKSGSWLRKKHKRLDAICEDEYNRNHGEFNECDDAAGAGVRRSSRVRRAPVVLDASPAPPKKRRRLGKDGMATGHVKGVKERLQQGSRNSSGSCDVESPGTWSSRLRSRVSRRNVGFGVKKERESPRGKRKLFESVVRSGGNRDLEVDEKEELEGGMPRIVKSKRPGRIKATKHEEGVKENESNQEGHKGNEAHEEGHKENGSHEEGHEESGSHEEGQQESESHEDGHEENESHEEGHEENESHQEHREIEYHGSSDESKSQEVEHMSDKDEESGLVPEIDVSRRNIVDLLDENAPSVMGNGERNMSSNLQAEECNGGIAGALVEHVEKEDDQLECVKEGNNASDAVEVAGISMMQVEIEGSVDKEVEIDDNALKDANIVTKDKPKQDSNSTPGHQRIKEGRRCGLCGGGTDGKPPKRLLQDNGESEDEAYSGSSASEEPNYDIWDGFSDEPGWLGHLLGPINDNYGIARIWVHQQCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATSGCRVDRCPKTYHLPCARASGCIFDHRKFLIACTDHRHLFEPHGDKYLARIKKLRARKMKWEMRKHSNEAWRRDITAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSASEPTCQGWESVAGLKGVIQCMKEVVILPLLYPELFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQRWPKPITGSLLEWIARKTPGYAGADLQALCTQAAINALKRNFPLQEVMSLAEEKHSGWKHLPLPSFAVEERDWLEAFSRSPLPCSRREAGNAANDVASSPLPIHLIPCLLGPLCSLLVSLCFDELPWLPPPLFKAVTVIKNEMVSALEKRKMPIDHWWLHVDDFLQESNIASEVKRKLACLGILSANDVFAGSSDIMDDKDDNRVKFVPSINNHLGMHSGLFPDKSFAFTNKSGFRILISGSPQSGQRHLASCVLYCFVGNIEMQKIDMATMSQEGHGDVVQGIAQILMKCASVHSCILFMPRIDLWAAEKHFQVSEETDSFSINHLSKASQVVEKESEFNTEKNSAEITKGQVDKKASHAWMSFTEQVESIGVSTSLMILATSEVPYSELPRKIREFFQSYLSKDSQSTPLEQTVPRFSLQLDGNFDRDMMVNLSVKELLRNVVEQQVQFIHQRSHVHVGVQKGHRIYDSIEVCKDKVSADEKKGEIQLPKSLTKVPPPPNSRSLKEKSTLLLAICTFGYQILLFPHFAELCWVTSKLKEGPCADVSGPWRGWPFNSCVIRPSNALDNLAVSCGSGGIKSKERSGVVRGLIAVGLSAYRGVYKSAREVSYDVRKVLEILIEKINAKIQAGKDRYQYLRILSQVACLEDIVNNWAYALLSLEQDSSELVPKVMPASVSSLNGHPSCEDHQAGGEDYRLVVPMNCDDSETPETNCKGISAETTGSLALNEKNDNTDNLDHDGRNTSSKGALQNHSSSDKHSNNSVDANPPVDPSLNQENGMPSGVSESVTAGNDVPAGREVRMSEDLNNSTCTDTAVLPENGLDTAFEQVGVERRNFNTVSNQPLSMSPADTGVKLSHVSSDKPENAIDTNLSSSNDCGDTESAVICMYQCCPGCLNSLYDVTHKLLACELSNSHWTIEDVHDAVSSLSVDLISAVRKCHMEEGFSDLSERTSRHEKYGTSLNLKTCDPRNQGKDFVPGECVSHSTSQHATASKDKVLNESLKLDFKFIFRDGVLVPLDPDRDVSFHCKFESLCLCSVKELIVVTKRPFG* 1902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0960 1901 MobiDBLite consensus disorder prediction 106 133 - -
Dod10g0960 1901 Gene3D - 663 837 IPR027417 -
Dod10g0960 1901 SMART AAA_5 698 839 IPR003593 -
Dod10g0960 1901 Pfam ATPase family associated with various cellular activities (AAA) 702 837 IPR003959 GO:0005524|GO:0016887
Dod10g0960 1901 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 473 578 IPR013083 -
Dod10g0960 1901 MobiDBLite consensus disorder prediction 1 16 - -
Dod10g0960 1901 MobiDBLite consensus disorder prediction 56 304 - -
Dod10g0960 1901 Pfam AAA+ lid domain 863 895 IPR041569 -
Dod10g0960 1901 MobiDBLite consensus disorder prediction 403 425 - -
Dod10g0960 1901 ProSitePatterns AAA-protein family signature. 807 825 IPR003960 GO:0005524|GO:0016887
Dod10g0960 1901 MobiDBLite consensus disorder prediction 1577 1644 - -
Dod10g0960 1901 MobiDBLite consensus disorder prediction 1595 1641 - -
Dod10g0960 1901 MobiDBLite consensus disorder prediction 81 99 - -
Dod10g0960 1901 Gene3D - 838 904 - -
Dod10g0960 1901 MobiDBLite consensus disorder prediction 192 302 - -
Dod10g0960 1901 Pfam PHD-like zinc-binding domain 497 576 - -
Dod10g0960 1901 MobiDBLite consensus disorder prediction 1 32 - -
Dod10g0960 1901 MobiDBLite consensus disorder prediction 403 461 - -
Dod10g0960 1901 PANTHER AAA DOMAIN-CONTAINING 62 1897 IPR045199 -
Dod10g0960 1901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 664 928 IPR027417 -
Dod10g0960 1901 MobiDBLite consensus disorder prediction 138 184 - -
Dod10g0960 1901 CDD AAA 696 837 - -
Dod10g0960 1901 ProSiteProfiles Extended PHD (ePHD) domain profile. 438 576 IPR034732 -
Dod10g0960 1901 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 62 1897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0960 Dod-Chr10 27548806 27557143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0960 664 899 Calmodulin-binding Proteins AT3G56690 40.756 1.84e-44 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0960 - - ahf:112772466 2663.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0960 10 27548806 27557143 Dod10g0960 10 27548806 27557143 ECH