Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0955 ATGGGTCGCCCACCCAGCAATGGAGGCCCTGCCTTTCGGTTTACTCAATCTGAGGTAGCGGAAATGGAAGCTATTTTGCATGAGCACAACAATGCAATGCCAGCACGCGATGTTCTTACAGCTATTGCAGAGAAGTTCAGTGAATCATCAGACCGTAAGGGCAAGATTACAGTGCAGATGAAGCAAGTTTGGAATTGGTTTCAAAATAAGCGGTATGCCATAAGGGCCAAATTAAATAAAACTCCTGGAAAGTTAGATATCACACCCATGCCTCGGAATGATTCAGCACTAGTGAGGAATATCACTCAACCAACAACTGCTCCAATTCCTACTGCTTCAGCTCCAACGGCAGGAAAAGCAACTCCAGAAAATTCTGTTACAGAATTTGAAGCTAAATCTGGAAGGGACAGAGCATGGTATGATGTTGCTAACTTTATATCTCACAGATATTTGGAGACCAGTGATCCGGAAGTGCTGGTAAGATTTTCTGGTTTTGGACCTGCGGAAGATGAGTGGGTAAATGTCAGAAGGAATGTCAGGCCACGTTCTCTCCCATGTGAATCCTCAGAATGCGTCGCAGTCCTCCCTGGAGATCTCATACTCTGTTTTCAGGAAGGTAAAGAGCAGGCCCTTTACTTTGATGCCCATGTCCTTGATGCTCAAAGACGGAGGCATGATGTTAGAGGTTGTCGTTGTAGATTTTTGGTTCGTTATGATCATGATCAGACAGAGGAAATCGTGCCACTTAGGAAGATTTGCCGACGGCCTGAAACTGATTACAGGTTACAGCAACTCCATGCTGTGCATGAGGGAGCACAAGTGCATCAGCAGAAGACTGGCATGGATCCAGCAACTACTCATGATGCCACCAGGGTTGTTGCTGCTGCTGGTGAAACACAAAAACAGCAGAATGCAAACATTCCCATCTCAGCATCAGCACAAAGCATGGATATGGATCCAAATAAAACCGAAAAAGCTATTGATGTTTCATCAGGAAACTCCATTGTCACCCCAGGCACTGCTTCATTCACAACCAACATTATCACGAGCAGTGTTGCTGGTGTCTCTTGTCAGAACTTGGCTGAAGGAAAATAA 1095 0.453 MGRPPSNGGPAFRFTQSEVAEMEAILHEHNNAMPARDVLTAIAEKFSESSDRKGKITVQMKQVWNWFQNKRYAIRAKLNKTPGKLDITPMPRNDSALVRNITQPTTAPIPTASAPTAGKATPENSVTEFEAKSGRDRAWYDVANFISHRYLETSDPEVLVRFSGFGPAEDEWVNVRRNVRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQTEEIVPLRKICRRPETDYRLQQLHAVHEGAQVHQQKTGMDPATTHDATRVVAAAGETQKQQNANIPISASAQSMDMDPNKTEKAIDVSSGNSIVTPGTASFTTNIITSSVAGVSCQNLAEGK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0955 364 MobiDBLite consensus disorder prediction 105 124 - -
Dod10g0955 364 Gene3D - 186 258 - -
Dod10g0955 364 CDD homeodomain 13 75 IPR001356 GO:0003677
Dod10g0955 364 SMART HOX_1 7 81 IPR001356 GO:0003677
Dod10g0955 364 SUPERFAMILY Homeodomain-like 4 76 IPR009057 -
Dod10g0955 364 Pfam SAWADEE domain 127 253 IPR032001 GO:0003682
Dod10g0955 364 Gene3D - 10 84 - -
Dod10g0955 364 Gene3D - 124 185 - -
Dod10g0955 364 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 323 IPR039276 -
Dod10g0955 364 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Dod10g0955 364 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0955 Dod-Chr10 27515968 27521101 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dod10g0955 SAWADEE 2.2e-39 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0955 - - aip:107630217 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0955 10 27515968 27521101 Dod10g0955 10 27515968 27521101 ECH