Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0948 ATGGCACAGTTACCTCCTAAGATACCAACCATACCCCAAAATTGGTCACCTTTTCCACACCAAAGGGTACAATCCACAATGTCAAATTTCACGCCCTCAACATCATCACCAACAACAACATCGTCTACCACTCAACAACAACAACAATTGTCATCGACATCATCATGGGTCGACGAGTTCCTCGACTTCTCGTCGGCTCGGCGGGGCGTCCACAGGCGCTCCGCCAGCGACTCGGCCGCCTTCTTGGAATCTCCCATGATGTTTTTCGACAGGCTGGACGATGACCAGCTCATGTTGATGTTCTCCGACGACGTCGCCGCCGTGGCGCAGCCGAATGCGCCGCCGTTGTCCACCTCCGACCCCTCGTCGCCGTCGTCCGACCAGACTAGTAACAACGAAGAGAAGCCGATGGCAACGGCGCTGGACGTTGCAACACACGTGCAGGAACAGCACCACGATCTTCACGTGAAGCCTAAGAGTGAAGCAGTTGAGGAGGATGGTTCGTGCAAGAATGAGACGGAGGCGCTGCCACCGTTCTCCGCCACCACCGGCAGCGCTGAAACAGTCGTTGATCCTAAAAGGGTCAAGAGGATTTTGGCTAACCGGCAATCAGCTCAGAGGTCAAGGGTGAGAAAGCTACAATACATTTCTGAGCTTGAAAGGAGCGTAACGACTTTGCAGACGGAGGTGTCAGCATTGTCACCACGAGTAGCGTTCTTGGACCACCAACGTTTGATTCTCAATGTCGACAATAGTACCTTGAAGCAACGGATTGCTGCTTTGGCGCAAGACAAGATTTTCAAAGACGCTCATCAAGAAGCATTGAAGAAAGAAATAGAAAGGCTGAGGCAAATCTATCTCCAACAGAACATACAGAAGATGGGTAATTCAGTCAACAATAACAACAATGGCCATTCTCTTCCATCCCCAAGAACATCACAGGCACAACTGCAACCACACTCTCTCCATCATCATCAGTTGGTAGCCTCTCAATCCTTGGTATGTAAGGACAATAAGCAGCTCCTTAGTTGA 1032 0.5078 MAQLPPKIPTIPQNWSPFPHQRVQSTMSNFTPSTSSPTTTSSTTQQQQQLSSTSSWVDEFLDFSSARRGVHRRSASDSAAFLESPMMFFDRLDDDQLMLMFSDDVAAVAQPNAPPLSTSDPSSPSSDQTSNNEEKPMATALDVATHVQEQHHDLHVKPKSEAVEEDGSCKNETEALPPFSATTGSAETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSTLKQRIAALAQDKIFKDAHQEALKKEIERLRQIYLQQNIQKMGNSVNNNNNGHSLPSPRTSQAQLQPHSLHHHQLVASQSLVCKDNKQLLS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0948 343 MobiDBLite consensus disorder prediction 295 322 - -
Dod10g0948 343 PANTHER BASIC LEUCINE ZIPPER 2 1 305 - -
Dod10g0948 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 191 243 IPR004827 GO:0003700|GO:0006355
Dod10g0948 343 SUPERFAMILY Leucine zipper domain 193 247 IPR046347 GO:0003700|GO:0006355
Dod10g0948 343 PANTHER BASIC LEUCINE ZIPPER 34 1 305 - -
Dod10g0948 343 MobiDBLite consensus disorder prediction 110 135 - -
Dod10g0948 343 MobiDBLite consensus disorder prediction 168 187 - -
Dod10g0948 343 Gene3D - 192 263 - -
Dod10g0948 343 MobiDBLite consensus disorder prediction 1 55 - -
Dod10g0948 343 Pfam bZIP transcription factor 193 237 IPR004827 GO:0003700|GO:0006355
Dod10g0948 343 CDD bZIP_plant_RF2 194 244 IPR044759 GO:0003700|GO:0006355
Dod10g0948 343 Coils Coil 272 292 - -
Dod10g0948 343 SMART brlzneu 189 253 IPR004827 GO:0003700|GO:0006355
Dod10g0948 343 MobiDBLite consensus disorder prediction 112 135 - -
Dod10g0948 343 MobiDBLite consensus disorder prediction 14 55 - -
Dod10g0948 343 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 196 211 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0948 Dod-Chr10 27453510 27458316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0948 1 271 bZIP Transcription Factor Family AT3G58120 50.512 3.38e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod10g0948 bZIP_1 9.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0948 - - gmx:100820197 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0948 10 27453510 27458316 Dod10g0948 10 27453510 27458316 ECH