Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0930 ATGATTCTCAGTGGAGTCTGCAACCTCCGCACATGCCTCCGCTTCCCGGAGACGCCGCTTTTCGGGGCACCGCCGCTCTCTCTCGCTTTCTGCCGGCGGTTTCTGACCACCGCTTCCGCCGCCGCTGCAACCGGAACGAACAAGAAAGAGAAGGTGATAGTGATTTCCGGTCCAACCGGTTCCGGCAAAAGCCGCCTCGCTCTTGAGCTTGCGAAGCGCCTCAATGGCGAAATCGTCAGCGCCGACTCTGTACAGAGTGTGTCCGTTGAAGATGGTTTCATTGGCTTGTGCCTCAGGTATATCGGGGTCTTGATATTGGATCTGCAAAGCCTTCCCCAAATGATAGAAAGGAGGTACCACATCATCTGGTTGACATACTTCACCCATCTGAAGTTTTTTGAGGATGCAAGGCAAGCTACAAGATGTATTCTTGACAGTGGACGTGTTCCCATAGTTGTCGGGGGCACCGGATTGTATTTAAGATGGTTCATATATGGGAAGCCAGACGTGCCTAAAGCTTCTCCAGAGATTACTTCTGAAGTACATCTAGAGTTGGCTGAGCTACAGAGAAATGAAGACTGGGATGCAGCTGTGCAGTTGGTGGTAAAAGCAGGTGATCCAAATGCCCAACATTTAGCAGCAAATGATTGGTACCGATTACGGCGTAGCCTAGAAATTATTAAGTCCAGTGGATCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGAAACAGGGTGACTGTAGTGTTGCTGATGGTTCTGAGTCGTCTGATGTGAACACAATGGAAGAAACCAACTCATCCGATTTAGACTATGAGTTTATGTGTTTTTTCCTTTCTATCCAAAGACTTGACCTCTATAGATCACTTGATTATCGGTGTGAAGATATGCTATTAGGACGGGATGGGATTCTTTCTGAGGCTCAATGGCTTCTTAATACTGGCCTTCTTCCAAATTCAAATTCGGCAACTCGAGCAATTGGTTACAGACAAGCCATGGAGTACTTATTAAGATGCAAAGAGCTAGGTGGTCAGAGTTCAGCTGGAGAATTTTACAAATTCTTATTTGAATTTCAAAAAGCATCACGGAATTTTGCAAAGAGACAGTTGACATGGTTTCGAAATGAACGTATATACCACTGGCTTGATGGTTCTAAACCTATGGAAACAGTTCTCGACTTCATTCTTGATGCATACCAACACCATGATTGGAGTGGAAATTTTGTTGTGCCTGAGCATCTAAGAATGTCGAGAGACGTTTCTAATCACCGAGAAGCTGCTTTAATTAAGTCTTACCATACCAAAAATAGGCATTTTGTCAACGGGGAAGATTGCTCTCACATTCTGGACTGGATAAGGAAGACTCAGAAGTGA 1380 0.4543 MILSGVCNLRTCLRFPETPLFGAPPLSLAFCRRFLTTASAAAATGTNKKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQSVSVEDGFIGLCLRYIGVLILDLQSLPQMIERRYHIIWLTYFTHLKFFEDARQATRCILDSGRVPIVVGGTGLYLRWFIYGKPDVPKASPEITSEVHLELAELQRNEDWDAAVQLVVKAGDPNAQHLAANDWYRLRRSLEIIKSSGSPPSAFRVPYDSFRKQGDCSVADGSESSDVNTMEETNSSDLDYEFMCFFLSIQRLDLYRSLDYRCEDMLLGRDGILSEAQWLLNTGLLPNSNSATRAIGYRQAMEYLLRCKELGGQSSAGEFYKFLFEFQKASRNFAKRQLTWFRNERIYHWLDGSKPMETVLDFILDAYQHHDWSGNFVVPEHLRMSRDVSNHREAALIKSYHTKNRHFVNGEDCSHILDWIRKTQK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0930 459 Hamap tRNA dimethylallyltransferase [miaA]. 52 395 IPR018022 GO:0008033
Dod10g0930 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 316 IPR027417 -
Dod10g0930 459 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 42 458 IPR039657 -
Dod10g0930 459 Gene3D - 49 447 IPR027417 -
Dod10g0930 459 CDD AAA 53 164 - -
Dod10g0930 459 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 42 458 - -
Dod10g0930 459 Gene3D - 169 239 - -
Dod10g0930 459 Pfam IPP transferase 127 378 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0930 55 338 C2H2 Transcription Factor Family AT2G27760 22.635 5.52e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0930 K00791 - gmx:100808814 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0930 10 27164732 27172324 Dod10g0930 10 27164732 27172324 ECH