Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0927 ATGGGTTCACCATTCAAGCCAATTCCATGCACCAGAAAAACCCCATGTAGATTAGAAACCAAGAACTTGTCATACCAATTGTGCAGCCAACTTGATGAGTATAGAAGCCTTTGTTTTGGTTCAAGTCCAAGGAGTGGTGGTAAGTACATTTTGAAGGATGTAACTTGTGAGGCAAGTTCTGGAGAGCTTACAGCTATTGCTGGTCCCAGTGGTGCTGGAAAAACCACACTGCTTGAAATTCTTGCTGGGAGAACATCCCCATGCAAAGTTTCTGGCCAAGTGCTTGTGAATCATAGGCCTATGGACTTGAACCGATTCAGAAGAACATCTGGCTATGTCACACAGGAAGATGCTTTGTTCCCATCACTTACTGTTAGAGAGACACTCATGTATAGTGCTATGCTGAGGCTTCCCGGGGGCCGAAAAGCGGCTGCTACCAGAGTTGCAGAGTTGATGAAGGAGCTTGGGTTGGATCATATTGCAGATTCAAGAATTGGTGGTGGATCAGGCCATGGCATATCAGGTGGCGAAAGGCGAAGAGTTTCCATTGGTGTTGATTTAGTCCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTAGATTCTGCGTCAGCTCTTAATGTAGTCTCATTGCTTAGACTAATGGCATTTAATCAAGGTAAGACGATTGTTTTGACCATCCACCAACCCAGTTTCCGAATCCTAGAGTTATTTGATGGCCTCATTTTGCTATCTAATGGGTTTGTCATGCACAATGGTTCATTGAATCTTCTTGAGGCTAGGCTCAAGTTAGCTGGGCATCACATTCCCCACCATGTCAATGTCCTTGAATTTGCCATTGATGTCATGCAAAGCTTGGTTATACATACTTCAGAATCTGAGGACAATCAATTTCTTCTCAAAGACAAAGATCACCAAGATCACAGGATGGGAATGCAGTACTCTAAGACTGTCAAAGAAAAGGCTCTCTTGTACTCAAATTCTCCAATGGTGGAGATTTTAATCCTCGGACAAAGGTTTTGCTGCAACATATTCAGAACTAAGCAACTCTTCACAGCCAGAGTCATACAGGCCTTAGTAGCTGGATTTGTGCTGGGGACTATATTTTTGAATGTTGGCAGCAAGCAAGGACAATTAGCAATGCAAGCAAGAAGCGGCTTTTTTGCTTTCAGCCTTACCTTTTTGTTATCATCAATAACAGAAGGTCTACCTATTTTCTTGGAAGAGAGAAGGACTTTTATGAGAGAGACCTCAGCCGGAGCTTATAGAGTTTCTTCCTATGTTTTAGCAAATACCCTTGTGTTTCTTCCATTCCTTCTAATGGTTTGTCTTCTATACACTACTCCAGTGTATTGGCTAGTTGGATTAAGGAAAGACATGGACGGATTTCTTTTCTTCTCTCTAGTGGTTTGGTTGGTACTCCTCATGTCCAATTCCCTAGTGGCTTGTTTCAGTGCTCTAGTGCCAAACTTCATTATGGGAAACTCGGTGATTGCAGGTCTAATGGGGTCTTTCTTTCTGTTCTCAGGGTATTTCATATCAAAGGACAAAATACCTAGTTACTGGAGTTTTATGCATTATTTGAGCTTATTCAAGTATCCATTTGAGTGTCTTGTGATAAATGAGTATGGAGGAGAGCAAGGGAAAACGAGATGCATAGAAACTAGGAATGGAGAATGCATATTACATGGAGTTGAGTTCTTAAGACAACAAGGTCTCAAGGAGTCAGAAAAATGGACCAACTTAGCTGTAATGTTGGGTTTCATAATAGGGTACAGAGTGCTTTGCTTCTGTATTCTTTGGTTCAGATGTTACAGGACCAGAAAATAA 1839 0.4182 MGSPFKPIPCTRKTPCRLETKNLSYQLCSQLDEYRSLCFGSSPRSGGKYILKDVTCEASSGELTAIAGPSGAGKTTLLEILAGRTSPCKVSGQVLVNHRPMDLNRFRRTSGYVTQEDALFPSLTVRETLMYSAMLRLPGGRKAAATRVAELMKELGLDHIADSRIGGGSGHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNVVSLLRLMAFNQGKTIVLTIHQPSFRILELFDGLILLSNGFVMHNGSLNLLEARLKLAGHHIPHHVNVLEFAIDVMQSLVIHTSESEDNQFLLKDKDHQDHRMGMQYSKTVKEKALLYSNSPMVEILILGQRFCCNIFRTKQLFTARVIQALVAGFVLGTIFLNVGSKQGQLAMQARSGFFAFSLTFLLSSITEGLPIFLEERRTFMRETSAGAYRVSSYVLANTLVFLPFLLMVCLLYTTPVYWLVGLRKDMDGFLFFSLVVWLVLLMSNSLVACFSALVPNFIMGNSVIAGLMGSFFLFSGYFISKDKIPSYWSFMHYLSLFKYPFECLVINEYGGEQGKTRCIETRNGECILHGVEFLRQQGLKESEKWTNLAVMLGFIIGYRVLCFCILWFRCYRTRK* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0927 612 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 274 IPR003439 GO:0005524
Dod10g0927 612 Gene3D - 19 277 IPR027417 -
Dod10g0927 612 Pfam ABC-2 type transporter 231 300 IPR043926 GO:0140359
Dod10g0927 612 CDD ABCG_EPDR 41 256 - -
Dod10g0927 612 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 604 - -
Dod10g0927 612 Pfam ABC transporter 51 201 IPR003439 GO:0005524
Dod10g0927 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 266 IPR027417 -
Dod10g0927 612 SMART AAA_5 60 251 IPR003593 -
Dod10g0927 612 Pfam ABC-2 type transporter 336 546 IPR013525 GO:0016020|GO:0140359
Dod10g0927 612 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 2 604 - -
Dod10g0927 612 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0927 Dod-Chr10 27151730 27153827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0927 31 261 Calmodulin-binding Proteins AT2G36910 28.151 1.16e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0927 K05681 - gmx:100807754 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0927 10 27151730 27153827 Dod10g0927 10 27151730 27153827 ECH