Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0926 ATGAGTTTTTTCTCTTGTCTTTGCCTGAAAAAGGGGTCGTCCTCAGCCACACAACCAGCCGATATTGATATAGATCTTTCAAACTTTCAGAATGTCAAGCTTTACACTTACAAGGAATTGCAAATTGCCACTGAACATTTTAGTCCAGCAAAGAAGATAGGGGAGGGCGGTTTTGGATCAGTCTATAAGGGTAAGCTGAGAGATGGTACTCTAGCTGCTATAAAGGTTTTGTCAGCTGAATCTAGCCAAGGGGTCCAGGAGTTCTTGACAGAAATCAAGGTGATCACTAGTATAGAGCATGAGAATCTAGTTAAGTTGCATGGATGCTGTGTGGAAAGAAACCAGAGGATTTTGGTATATGGCTATCTTGAGAATAATAGTCTAGCACAAACACTTCTTGGTGGAGGCCATAGTAGCTTGCAATTTCGTTGGCATGCACGGAGGAACATTTGCATTGGTGTTGCCCGGGGCCTTGCATTTCTTCATCATGAAGTTGAGCCACATATTATTCATAGAGACATTAAAGCAAGCAACATATTACTTGACAAAGACCTCCAGCCCAGAATTTCAGATTTTGGCCTAGCAAGGCTTATTCCAACAAACCAGACCCATGTTAGTACACTTGTTGCTGGTACAGTTGGCTATCTAGCACCTGAATACGCAATACGAAGTCAAGTGACAAGAAAATCAGATGTCTATAGTTTTGGAGTTCTACTACTAGAAATCCTTAGTGGGAGGGGTAACACAAACAGACGTCTACCTGTTGAAGAACGGCACCTTCATACAAAGGCATGGGATTTGTATGAGAAGGAAGAGCTGGAGAGTTTGATGGATGCCTCACTAAACGGAGACTTCAACGTTGAGGAGGCAATAAGGTTTTGCAAGATTGCGCTTCTCTGCATTCAGGATTCTCTTCAACTCCGGCCTTCTATGTCTACTGTGCTTGACATGCTGACAGGTGAAGCTGATGTAAATGAGAAGAAGATGACAAAACCAGGCTTAATATTTGAATTTGTGGAAGCCAAAGACCAAGGGAAACAAAAAGACAAGGTTGAAGTGGGAAATACAACTATCTTGGCTAGTTCAGGGAAGCAAGATGATGATTCATCTTTATCGGCAAGCACGAGCTCTTTTGCTACCATGACCTTCACTTCAATTTATGACCGAACCAATTAA 1176 0.4218 MSFFSCLCLKKGSSSATQPADIDIDLSNFQNVKLYTYKELQIATEHFSPAKKIGEGGFGSVYKGKLRDGTLAAIKVLSAESSQGVQEFLTEIKVITSIEHENLVKLHGCCVERNQRILVYGYLENNSLAQTLLGGGHSSLQFRWHARRNICIGVARGLAFLHHEVEPHIIHRDIKASNILLDKDLQPRISDFGLARLIPTNQTHVSTLVAGTVGYLAPEYAIRSQVTRKSDVYSFGVLLLEILSGRGNTNRRLPVEERHLHTKAWDLYEKEELESLMDASLNGDFNVEEAIRFCKIALLCIQDSLQLRPSMSTVLDMLTGEADVNEKKMTKPGLIFEFVEAKDQGKQKDKVEVGNTTILASSGKQDDDSSLSASTSSFATMTFTSIYDRTN* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0926 391 SUPERFAMILY Protein kinase-like (PK-like) 25 318 IPR011009 -
Dod10g0926 391 CDD STKc_IRAK 53 320 - -
Dod10g0926 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Dod10g0926 391 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Dod10g0926 391 SMART serkin_6 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0926 391 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 374 - -
Dod10g0926 391 Pfam Protein kinase domain 50 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0926 391 Gene3D Phosphorylase Kinase; domain 1 19 122 - -
Dod10g0926 391 ProSiteProfiles Protein kinase domain profile. 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0926 391 PANTHER RECEPTOR-LIKE KINASE 6 374 - -
Dod10g0926 391 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0926 Dod-Chr10 27147084 27151593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0926 35 335 Receptor kinase-like Gene Family AT1G56120 52.824 2.87e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g0926 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0926 - - adu:107459855 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0926 10 27147084 27151593 Dod10g0926 10 27147084 27151593 ECH