Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0924 ATGTCAATCAGCAAAGAAACAGAGGATTTATGTGATGAGGGATCTAATGAAGAAAGACAGATTTTTATGGAGGTCTTTTCTGGTAATGACATTTTTCAGTCTGATTGGAGGTGTCTTGTCTCTGGAGTTATCCACTTTGAATGTGAATCTGCTAAAAACACGTTCAAATCATTCTGCTCTAGTAATGAAAACTCAGTTGTATTGCGTCCCTCATCTTCAAGACTGATGCATCCTGAGGAGAACTTAAATATAATTCAGCATTCCAAAGAGACTGCTCCAGGGTGTGTTCCGGAGAGTTCCATATGTAATGATCAGAATGATGAGGATGTGAATGTCAAACGTATGAAGTTTTCTTTACATGAACCTCCTTGTAGTAGATCTGATTCGGAAAATGTTTTGAGTTCATCAGAACTCTCAAAAGATGTAGTTTCTAACCTGTCTCGTGCTGTTACAGACTGTGACAGTGAACCAGTTGCATTTCGTTTAGTTGAATCATCTAATCGTGGTGTGATATCTAGTTGCTATCTGTCGAAGTATAACATGTTACAGAATAAACAAGCTTTGAAGGATGATGTAGACGTTACAAATTGTAAATCGACAACTGCAGAGGAGAATGTTGCAAAAGAGGTGGCTGTAGGTAAAGCGGCTGCTTCTCCTGTTTCTCAGGAGAGCTTTGCAAACAGGCTTGTAGTTACGAGTCCATCAATAACTGTTGTGAATCCTTTACATCCTGAGGAAATGTCAAAAGGGTTTCTGTCTTCTAACATGGACATGTCAGATTCATCCTCAAAGCTGGACCAAAGGGATCCTCGTACTTTGCTGCATTTTCAAATTGTGAAGTTGCTTACAATGGCAGGATGGTCTATTGAGAAGCGTAAACGACCTAGTAGGCGTTACATGGAGTCGGTTTATAGGACTCCAAAGGGCAAGCCTGTTCGGGAATTTACAAAAGCTTGGAGATTATGTGGTCAGCTTTTGTCTGTTGAAAATTGCAATTTAGTGCGTGGAGATCGGGAGGAATGGACAGATATTAGTCAATTCTGGTCTGATCTATCCACTGCACTGATAAATGTTGAAAAAGCAATGAACCAGTCAGAGCCTGCTGCTATGTTGGCTTATCAATGGCGACTTTTGGATCCTTATGTAGTGGTTGTATTTCTTGATAGAAAGATTGGTGCACTGAAAAAGGGAGAAGCAGTGAAATCAACTCGGAGTTTAGTTTCTAGAAAACATGCTTGTAATTGGAAATCTGGTGAAGATATATATGTTGTAGAACATGCCAGTAGCACAGGAAATCAATGTAGGAATGTATCTGTAAACAAAAGCTGTATGGATCTAGTTTCCTATGGATTAGATAGCCGTGGTACTGAGCCAGGTGCTGGCTCTGTCGACGTTCTTACAAGCTCTGGAAATTCAATCCAGGTACTTGGAGGGTCTAAAGTAAACGAGGGTCATCAAGCTAAAGTTGGAAATTCTAAAAGCTTTGATGAAGATAAAAGAATTGGGGGATATGTTCCAATGTGCATGTCAGAGGAAAAGAATGCATATGGCGTAAGCCATGGCCTGGTTTTTTCTCATGACTCACAGGCTTTTCAACAGTCTGATTGCAGTGATGATGAGGCCAGGAAAATCTCAATGGCTTCTGTATTTGGGACAGATAGGACATGTTCTGCCACTAATGTTAAAAAGAAAATGAGGAGGAAATGCAAAAAGGTATCTGAAATCAAACTGAGTATGTTATACCGTAGTGACATGGTGGGATCAACTGTAACTGAGCAGTCACAGAACAGTGGCGCATGTGGCACTCAGTTAGGGTTGGAAGAGGTCCAGGGTTTTGTAGTTGACAATGCAGGAAAGAAAAGAAGCCAGGGGAAGTTATCATCTATCAATACATTCCAGCAACATATGAGGAAAACAAGCTACTCCATAACTGGAACGAATAAGTCCAGCAGATGCCAGATTAAAGATGATGATCTGTTGGTGTCAGCAATATTCAGGAACAAGGATTTCAGCCCAAATACAATGCGTGGTAATTCTAGAGCTAGATCCAGCAAATCAAGAGGCCAGAGAAAGCTTAAAAGCCAAAAGGGTCGATGCCGGTTGCTACCAAGGAACCTTTGTAACGGGGGGAAGCACAATAAGGATGGTAAGAGGTACTATTTGGGGGAAAGGACAGTCTTGTCATGGTTGATTGAGAATGGAGTTGTATCTTTAAATGATGTGATTCAATACCGAAACCCTAAAGATGATGCTGTCATTAAGGATGGTAAGATTACCAAAGATGGTATTATCTGTAAGTGTTGCGGTAAGGTGCTTACATTATCAGAGTTCAAGTTCCATGCTGGGTTTATGCTGAATCGCCCCTGCTTGAATCTTTTCATGGCGTCTGGTGAGCCCTTTACCCTGTGCCTCCTTCAAGCTTGGTCAGCTGAATACAAAGCCAGGAAGAGTCAAAACCAAGCTGTGCAAGTTGTTGATGACGATAGAAATGATGACTCTTGTGGGTTGTGTGGCGAAGGGGGTGAGCTGATATGTTGTGATAACTGTCCATCTACTTTTCATCTGGCATGTCTGTCCACGCAGGAAATCCCTGATGGCGATTGGTACTGCACTAACTGCACTTGTCGGGTATGTGGAAATCTGGTCATGAATAAAGAGGCTTCAGATGTGTATGATTCATTGCAATGTTTACAGTGTGAACAAAAATATCATGATAAGTGCCTGATAGAAAGAGATAAGCAAGATGGGTTGCCACCAGACACTTGGTTTTGTGGTCAGAGTTGTCAGGAGGTATACTCTGGTCTCCAGTCTCTAGTGGGGTTAGTTAATCAAGTATCCAATGGCTTATCATGGATGCTTCTTAGATGCATACATGATGACCAAAAGGTTCATTCTGCCCAGTGGTTTGCCCTAAAGGCGCTATGCAATACAAAATTAGCTGTTGCCCTTACTATCATGGAGGAGTGTTTCTTGTCGATGTTGGATCCGAGAACAGGCATACACATGATACCCCAAGTTTTATACAACTGGGGGTCTGATTTTGCTCGTCTGAATTTTCAAGGGTTTTACACTGTGGTACTGGAAAATCAGGATGTGTTAGTATCTGTAGCATCTATCAGGGTGCATGGAACTTCATTTGCTGAGATGCCTCTCATTGCAACTTGCAGTCGGTATCGTCGTCAAGGAATGTGCCGACTCCTTGTGAGTGCAATTGAAGAGATGCTAATATCTGCCAAGGTCGAAAAACTAGTGGTAGCAGCAATTCCAGATTTGGTGGAGACATGGACTAAGGGCTTTGGATTCATGCCTGTAGATGACATTGAAAAGCAAAAGTTGAAAAAAATCAACTTGATGGTTTTTCCTGGGACGGTGTTACTTGAAAAACCCTTGTACGAGAAGGAGAAAACTGAAGGTACATGTGATGTATTGACTATGGCAACAGATGAATCAACCAAAGTAGTTATGTGTTCCGAAGGAATGGCTGTCGGTGAATCGTCGCTGCCAAATGTTGGAACCATAGCCACTGACGAAGTCGGTGTTAATAAGTCAGAATCCGAACATGTGGATAGCAACAATCATCCAGAATGTAGAGCTGACAATGAAACTGGTGAAGATGACAATACTCAAGCTATTGACAACACTGCATTAGGAGCCAAAGAATCAACAGAAACAAGTAACTGTTTAGGAGGAGAAGAGATGATCACCCAGGCAGCAGTGTTGGATGAGTCAGAGAAATCTATTGATGAGAACAGCATGCAGGGACCGAGATCAAGCGATGAAAAGGAAATGGCAAGTGAGTTGGGACAGCAGTTGAGTGAGAGCTGTTGTGCTAACAAAGATGGTGCTGAATCAGGTGCAACAACTATTGGGGACAAGGATATCAAAGTAGGTGAAGTTCAGGAAAATGCATTGCTGGGTAATTTTTCAAATTTGTCCTGCAAAACATTCTTAGGCAGCAATTTTGACATTGATTCTAATATTGAGCGCTCAGTGTTGTATGATGAAACAGCTATTTTTGGAACAGTTGCAAAGTCTGCAAGCTGA 4044 0.4172 MSISKETEDLCDEGSNEERQIFMEVFSGNDIFQSDWRCLVSGVIHFECESAKNTFKSFCSSNENSVVLRPSSSRLMHPEENLNIIQHSKETAPGCVPESSICNDQNDEDVNVKRMKFSLHEPPCSRSDSENVLSSSELSKDVVSNLSRAVTDCDSEPVAFRLVESSNRGVISSCYLSKYNMLQNKQALKDDVDVTNCKSTTAEENVAKEVAVGKAAASPVSQESFANRLVVTSPSITVVNPLHPEEMSKGFLSSNMDMSDSSSKLDQRDPRTLLHFQIVKLLTMAGWSIEKRKRPSRRYMESVYRTPKGKPVREFTKAWRLCGQLLSVENCNLVRGDREEWTDISQFWSDLSTALINVEKAMNQSEPAAMLAYQWRLLDPYVVVVFLDRKIGALKKGEAVKSTRSLVSRKHACNWKSGEDIYVVEHASSTGNQCRNVSVNKSCMDLVSYGLDSRGTEPGAGSVDVLTSSGNSIQVLGGSKVNEGHQAKVGNSKSFDEDKRIGGYVPMCMSEEKNAYGVSHGLVFSHDSQAFQQSDCSDDEARKISMASVFGTDRTCSATNVKKKMRRKCKKVSEIKLSMLYRSDMVGSTVTEQSQNSGACGTQLGLEEVQGFVVDNAGKKRSQGKLSSINTFQQHMRKTSYSITGTNKSSRCQIKDDDLLVSAIFRNKDFSPNTMRGNSRARSSKSRGQRKLKSQKGRCRLLPRNLCNGGKHNKDGKRYYLGERTVLSWLIENGVVSLNDVIQYRNPKDDAVIKDGKITKDGIICKCCGKVLTLSEFKFHAGFMLNRPCLNLFMASGEPFTLCLLQAWSAEYKARKSQNQAVQVVDDDRNDDSCGLCGEGGELICCDNCPSTFHLACLSTQEIPDGDWYCTNCTCRVCGNLVMNKEASDVYDSLQCLQCEQKYHDKCLIERDKQDGLPPDTWFCGQSCQEVYSGLQSLVGLVNQVSNGLSWMLLRCIHDDQKVHSAQWFALKALCNTKLAVALTIMEECFLSMLDPRTGIHMIPQVLYNWGSDFARLNFQGFYTVVLENQDVLVSVASIRVHGTSFAEMPLIATCSRYRRQGMCRLLVSAIEEMLISAKVEKLVVAAIPDLVETWTKGFGFMPVDDIEKQKLKKINLMVFPGTVLLEKPLYEKEKTEGTCDVLTMATDESTKVVMCSEGMAVGESSLPNVGTIATDEVGVNKSESEHVDSNNHPECRADNETGEDDNTQAIDNTALGAKESTETSNCLGGEEMITQAAVLDESEKSIDENSMQGPRSSDEKEMASELGQQLSESCCANKDGAESGATTIGDKDIKVGEVQENALLGNFSNLSCKTFLGSNFDIDSNIERSVLYDETAIFGTVAKSAS* 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0924 1347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 818 889 IPR013083 -
Dod10g0924 1347 ProSiteProfiles Zinc finger PHD-type profile. 831 876 IPR019787 -
Dod10g0924 1347 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 983 1107 IPR016181 -
Dod10g0924 1347 PANTHER PHD FINGER PROTEIN 12 1 417 IPR042163 GO:0003714|GO:0045892
Dod10g0924 1347 MobiDBLite consensus disorder prediction 671 696 - -
Dod10g0924 1347 PANTHER INCREASED DNA METHYLATION 1 442 1344 - -
Dod10g0924 1347 Gene3D - 1005 1118 - -
Dod10g0924 1347 CDD NAT_SF 1025 1085 - -
Dod10g0924 1347 Pfam Tify domain binding domain 756 806 IPR032308 -
Dod10g0924 1347 MobiDBLite consensus disorder prediction 1182 1204 - -
Dod10g0924 1347 CDD PHD2_CHD_II 833 873 - -
Dod10g0924 1347 Pfam PHD-finger 834 875 IPR019787 -
Dod10g0924 1347 MobiDBLite consensus disorder prediction 1242 1262 - -
Dod10g0924 1347 PANTHER INCREASED DNA METHYLATION 1 1 417 - -
Dod10g0924 1347 SUPERFAMILY FYVE/PHD zinc finger 819 874 IPR011011 -
Dod10g0924 1347 PANTHER PHD FINGER PROTEIN 12 442 1344 IPR042163 GO:0003714|GO:0045892
Dod10g0924 1347 MobiDBLite consensus disorder prediction 1182 1207 - -
Dod10g0924 1347 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 984 1131 IPR000182 GO:0016407
Dod10g0924 1347 SMART PHD_3 833 874 IPR001965 -
Dod10g0924 1347 SMART PHD_3 875 929 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0924 Dod-Chr10 27103875 27113014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0924 11 405 PHD Transcription Factor Family AT3G14980 33.911 4.86e-48 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Dod10g0924 TDBD 1.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0924 - - adu:107459718 1898.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0924 10 27103875 27113014 Dod10g0924 10 27103875 27113014 ECH