Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0919 ATGGCGGCGAATCGGAGCTCCAGGACCGACGTTCTCGGCTCCGGGATGGGGAATTACGGCCATGGCAGCATAATTCGTGGCGGTGGCAAGGCCGGCGAGCCGGCGCACCCCCTGAGTTTGAGGGCGGGCGGTGGCATTGGCAGCGATGGCAATGCGGGCAGGAGAGGGGTGCAGGGTGTGGATCCGGAGGAGCTGAAGAGGGTTGGGAATGAGCATTACAAGAAGGGGCATTTTGCTGAGGCCTTGGGGATGTATGATCGGGCAATTGCGCTTTCTCCGGCCAGCGCCGCATATCGGAGCAACCGTGCTGCGGCGTTGACGGGGCTTGGGAGGCTTGTGGAGGCTGTGAGGGAGTGTGAGGAGGCTGTGAGGTTGGATCCTAACTATGGCAGGGCACATCAGCGCTTGGCATCTCTTTTCCTAAGGCTGGGACAAGTTGAGAATGCCAGGAAGCACCTTTGTTACCCTGGGATGCACCGGGATCCGGAGGAGATGCAGAAGTTGCAAGCGGTGGAAAAGCATATCAGCAAATGTGGGGATCTCCGGAGGATTAGGGATTGGAAAAGTGTTCTGAGGGAAGTTGATGCTGCTGTTGCTTCTGGAGCTGACTCTTGTCCTCAGCTCTTTATGTGTAGAGCAGAGGCCTTTTTGAAGCTCCACCAAATTGATGATGCAGAATCAATTTCTTTACATATTCCAAAATCGGAACCACATGCTAATTCCTCTTCTCAAGCAAGGTTTTTTGGGATGCTTTCTGAAGCATATCCCTACTTTGTTAGAGCTCAGATTGAGATGGCATTGGGAAGGTTTGAGAACGCAGTTACAGCAGCTGAGAAAGCCAGTCAAATTGACCCTCGGAATGTTGAGGTTGCTGTGCTGCTCAACAATGTGAGGATGGTGGCGAGAGCTCGGGTGCGCGGCAATGATCTTTTTAAGTCGGAAAGGTTTACTGAAGCTTGCTCCGCATATGGAGAAGGCTTGAGGCTGGACCCTTCAAATTCTGTTCTATATTGCAATAGAGCAGCTTGTTGGTTTAAGCTTGGGCAATGGGAAAGATCAATTGAAGACTCCAATCAAGCTTTAAGTATCCAGCCAAATTACACTAAAGCCCTTCTTCGAAGGGCTGCATCAAACAGCAAGCTTGAAAGGTGGGAAGAAGCAGTCAAAGATTATGAGGTCTTGCGGAGAGAACTTCCAAATGACAATGAAGTTGCTGAAGCTCTTTTTCATGCACAAGTTGCACTGAAGAAATCACGCGGGGAAGAAGTACATAATTTAAAATTTGGTGGTGAAGTGGAAGAAGTATCAGGTCTTGAGCAGTTTAGAGCTGCAATATCTCTACCAGGTGTTTCTGTTGTCCATTTTGAAATTGCATCTAACTCGCAATGCAAGCAAATATCACCATTTGTCGATACACTATGTGGACGATATCCATCCATTAACTTCCTCAAGGTGGATATTCAAGAAAGTCCTACAGTTGCAACTGCTGAGAACGTTCGGATTGTACCAACCTTCAAGATATACAAAAATGGCAGCCGGGTGAAGGAAATCGTGTGCCCTAGTCGTGATATGTTGGAACACTCCGTGAGGCATTACAGTTTTTAG 1605 0.4903 MAANRSSRTDVLGSGMGNYGHGSIIRGGGKAGEPAHPLSLRAGGGIGSDGNAGRRGVQGVDPEELKRVGNEHYKKGHFAEALGMYDRAIALSPASAAYRSNRAAALTGLGRLVEAVRECEEAVRLDPNYGRAHQRLASLFLRLGQVENARKHLCYPGMHRDPEEMQKLQAVEKHISKCGDLRRIRDWKSVLREVDAAVASGADSCPQLFMCRAEAFLKLHQIDDAESISLHIPKSEPHANSSSQARFFGMLSEAYPYFVRAQIEMALGRFENAVTAAEKASQIDPRNVEVAVLLNNVRMVARARVRGNDLFKSERFTEACSAYGEGLRLDPSNSVLYCNRAACWFKLGQWERSIEDSNQALSIQPNYTKALLRRAASNSKLERWEEAVKDYEVLRRELPNDNEVAEALFHAQVALKKSRGEEVHNLKFGGEVEEVSGLEQFRAAISLPGVSVVHFEIASNSQCKQISPFVDTLCGRYPSINFLKVDIQESPTVATAENVRIVPTFKIYKNGSRVKEIVCPSRDMLEHSVRHYSF* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0919 534 ProSiteProfiles TPR repeat profile. 334 367 IPR019734 GO:0005515
Dod10g0919 534 CDD TRX_family 439 526 - -
Dod10g0919 534 SMART tpr_5 368 401 IPR019734 GO:0005515
Dod10g0919 534 SMART tpr_5 300 333 IPR019734 GO:0005515
Dod10g0919 534 SMART tpr_5 254 287 IPR019734 GO:0005515
Dod10g0919 534 SMART tpr_5 62 95 IPR019734 GO:0005515
Dod10g0919 534 SMART tpr_5 334 367 IPR019734 GO:0005515
Dod10g0919 534 SMART tpr_5 96 129 IPR019734 GO:0005515
Dod10g0919 534 Pfam Thioredoxin 440 525 IPR013766 -
Dod10g0919 534 ProSiteProfiles TPR repeat profile. 62 95 IPR019734 GO:0005515
Dod10g0919 534 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL1 1 532 - -
Dod10g0919 534 Gene3D Glutaredoxin 426 533 - -
Dod10g0919 534 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 532 IPR044534 -
Dod10g0919 534 ProSiteProfiles TPR repeat profile. 254 287 IPR019734 GO:0005515
Dod10g0919 534 MobiDBLite consensus disorder prediction 25 63 - -
Dod10g0919 534 SUPERFAMILY TPR-like 62 290 IPR011990 GO:0005515
Dod10g0919 534 Pfam Tetratricopeptide repeat 257 287 IPR019734 GO:0005515
Dod10g0919 534 Pfam Tetratricopeptide repeat 69 128 - -
Dod10g0919 534 Gene3D Tetratricopeptide repeat domain 60 420 IPR011990 GO:0005515
Dod10g0919 534 SUPERFAMILY Thioredoxin-like 337 532 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0919 Dod-Chr10 27010667 27014835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0919 299 444 U-box Gene Family AT3G07370 28.962 9.56e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0919 - - adu:107459775 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0919 10 27010667 27014835 Dod10g0919 10 27010667 27014835 ECH