Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0884 ATGGAGAATACTACTCATTCTTTAAAGGGAAGAAGGGCAATTGAACAAGAGCTACTAAGAGGGCGTGAAATAGCAAACCACTTGCATGAAGTACTTGTTCATAAGCCCAAGAGCAATGAAGGACAAGGGTCGATATTACAATTTGCGGAAGATCTTGTGCACCAAGTACTAAGATCATTCACAAATTCCCTTTTGCTCTTGAACACCAATTGTGATGATGTCGCTGATGAGGTGGTTCTTCCTATCAAAATCGGAGATTTCTCTTCGTCCCCCAGTTTTGACACAAAAAGTCGAATAGGGCGCTACAAGAGAAAATCAACGGTACCAAATTGGGAGAAGGACAGTCCAATTCTAACTGAAGATGGTCATCAATGGAGAAAATATGGACAAAAGAAGACAACGAATTCAAAATACATCAGGAACTACTATAGGTGCACGCACAAGCTTGATCAGGGATGCCCAGCAATCAAACAGGTGCAGCAAATTCAAGAGGATCCTCCATTGTACCGGACAACCTATATTGGTCATCACAACTGCAAAAGCTCATATATTAATCATGAGATTTTTGTGGAAGCCGATTCGTTTCCTGGCTCTTCTGTATTGCTTAGCTTCAATAACAGCATCCCTACCAACGAGCACCCATTTTCATCACCAGTTTTTGAATCAACAAAACAGGAGCCTGTGGAAGTCATTCATGATGATCATATTGCTCACAACCAATTTTCCTTATCAGATTACTTCCTATTATGTGACTATGAACTTGATTCCAATGATTCTAGGCATGTCGATATGCTATCATCCACGGATGATGCTGTTCAATTTGACAATGTTTATGGAGGCAGTTTGGATTTTGATGGCTTGGCATGTTTCGCGCAACAAAATTTTGACTCGGGAGGAGATGGAAAGACAATTGGTGACTTTATCATGGGACACAGCCTCATTAATATTGGAATTTAG 957 0.4054 MENTTHSLKGRRAIEQELLRGREIANHLHEVLVHKPKSNEGQGSILQFAEDLVHQVLRSFTNSLLLLNTNCDDVADEVVLPIKIGDFSSSPSFDTKSRIGRYKRKSTVPNWEKDSPILTEDGHQWRKYGQKKTTNSKYIRNYYRCTHKLDQGCPAIKQVQQIQEDPPLYRTTYIGHHNCKSSYINHEIFVEADSFPGSSVLLSFNNSIPTNEHPFSSPVFESTKQEPVEVIHDDHIAHNQFSLSDYFLLCDYELDSNDSRHVDMLSSTDDAVQFDNVYGGSLDFDGLACFAQQNFDSGGDGKTIGDFIMGHSLINIGI* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0884 318 Gene3D WRKY domain 106 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod10g0884 318 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 276 IPR044810 GO:0003700
Dod10g0884 318 SUPERFAMILY WRKY DNA-binding domain 117 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod10g0884 318 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 276 - -
Dod10g0884 318 ProSiteProfiles WRKY domain profile. 114 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod10g0884 318 SMART WRKY_cls 119 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod10g0884 318 Pfam WRKY DNA -binding domain 120 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0884 Dod-Chr10 26509867 26512393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0884 14 285 WRKY Transcription Factor Family AT3G56400 30.405 5.54e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod10g0884 WRKY 2.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0884 - - gmx:102663141 312.383