Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0874 ATGTTTGATATTGTTCTTGTTCTACTTAGATATTTAACTGGAAATTTACTCACTGGACAATTGCCCACGTGGACAAAGAATTTTAAATCCATAGATCTTGCATATAACAACTTCAGCAATGAAAACTCAGCAGTGACATGTCGAGAGCCAAACATGAACTTGTTTGCTAGTTTTTCAAATGGCAATAGCACAGGACCCCTTCAATGTGGGAAAAAAGAGTCCTGCTCGAAAACATATGATTCTTTCCGTATAAACTGTGGTGGAGGACAGTTGACCATCGGAAGTACAACATATGATGGCCCTGAAGAACGATGCTCAAAATTGAATTGGCCAACAAGGCACAAGATTTGTGTTGGTATTGCTAGAGCTTTGGCATTCCTGCATGAAGAATCAAGACTGAAAATTGTTCATAGGGACATAAAGGCTACCAATGTGTTGCTTGACAAAGATCTAAATCCAAAGGTATCTGATTTTGGTTTGGCCAAACTCAATGAGGAGGACACTACTCATATTAGTACCCGAATAGCTGGAACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTAACTGACAAAGCAGATGTCTATAGTTTTGGCATTGTTGCCTTGGAAATCATTAGTGGAAAGGTCAACACCATTCGCCGGTCAAAGGAGGAAGTATTATATCTTCTTGATTGGGTACATCTCTTGAAGGAGAAAGATATGCTCATGGAGCTAGTTGATAGAAGGTTGGACGTTGGGAGGCAACAGTATCCGTTACTTATATGTATTTGA 783 0.3934 MFDIVLVLLRYLTGNLLTGQLPTWTKNFKSIDLAYNNFSNENSAVTCREPNMNLFASFSNGNSTGPLQCGKKESCSKTYDSFRINCGGGQLTIGSTTYDGPEERCSKLNWPTRHKICVGIARALAFLHEESRLKIVHRDIKATNVLLDKDLNPKVSDFGLAKLNEEDTTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIISGKVNTIRRSKEEVLYLLDWVHLLKEKDMLMELVDRRLDVGRQQYPLLICI* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0874 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Dod10g0874 260 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0874 260 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 104 246 - -
Dod10g0874 260 SMART serkin_6 2 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0874 260 Gene3D Transferase(Phosphotransferase) domain 1 98 257 - -
Dod10g0874 260 SUPERFAMILY Protein kinase-like (PK-like) 106 235 IPR011009 -
Dod10g0874 260 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 104 246 - -
Dod10g0874 260 Pfam Protein tyrosine and serine/threonine kinase 106 227 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0874 Dod-Chr10 25960175 25970196 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0874 11 99 Receptor kinase-like Gene Family AT1G53420 36.264 3.25e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g0874 PK_Tyr_Ser-Thr 7.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0874 - - gmx:100305430 259.225