Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0870 ATGAGTTTCTCTCTACTTTTCCACCTTTGGCTTCTTGCTTCTTGCTTCGCCTCTTTGGCTAGTGGAGCTACTCTGGTAGAAGACGAAGTGAAAGTTTTGAAGGAGATAGGTAAGAGACTTGGGAAGAAGGATTGGGACTTCAGCGTTGACCCGTGCAGTGGAGAAAGGAACTGGACATCATCCGGCGTTCAGGCGAAAGAATCGATAAATGCTGTAACCTGCAATTGCTCTTTTGCTGAGGCCACTATCTGCCATGTTGTTAGCATAGTTTTGAAGTCACAAAATCTTTTGGGTACTCTGCCAGCGGAGTTTGCGAGGTTGCCTTACCTCCAAGAAATTGATCTCACCCTCAACTACCTTAACGGCACAATCCCAACACAATGGAGTTCCTTGGCTCTTGTCAACATTTCTCTTTATGGAAATCGTCTAACAGGTCCAATTCCAAAGGAGCTAGGAGAAATAACCACTCTCAGAAGTTTGGTCCTGGAGTTCAATCAATTCTCTGGAAATCTTCCTCCAGAGCTTGGGAACCTTTCCCAGATTGAAATAATGCTTCTTACCTCAAATAACTTCACTGGAGAGTTACCTGCAACATTTGCTAAGCTCAGTACATTGAAGCACATTCGACTAGGTGACAATCAATTCTCTGGAGCAATACCCAATTTTATTCAGAAATGGACAAGTGTTGAGGCAATGGTAATCCAAGGTAGTGGCTTGAGTGGTCCAATTCCTTCTGGAATTTCACTTATGAAAAACCTCATTGACTTGAGAATTACTGACTTGAATGGACCTGACTCATCTTTTCCCCAACTAGATAGTATGACAAATTTGAAAGTTCTAATATTGAGGAGTTGCAATATTATTGGAGCAGTGCCTGAAAATCTTGGAAGATTGAGTAATTTGCAAGTGTTAGATCTAAGCTACAACAAATTAAGTGGACAAATTCCGAGCAGCTTGGCTGGCCCGCAGCAACTGAATATGATACTTTTAACTGGGAACCTTCTAACTGGATCGCTGCCTGGTTGGATATATAGGCGTCCTGTTGTAGATTGCTCATTTAACAACTTCAGCATAAGTAGCTCAGAGCAGCTAGGTTGTCAACAGGGAGGCACGAACTTGTTTGCATCCTCTTTGAATGGCAATAGCTTGGGGAATATTTCATGTTTGCCAAACACTGGGTGTCCTAACCCTTGGTACTCTCTTCATATAAATTGTGGTGGAAAGCAAGCACTTTCTAATGGAAATCAGAAATATGATGATGATTCTAGTGAGACTGGACCAGCAAGCTTTCTCCTTCAAGGAACAAACTGGGCACTCATCAATACTGGCCACTTCTTCGATAGTGATCGTGCAGACTACTATACATGGTCTACTACAAATAAGCTTGCAATGGACAATGCCGAATTGTACATGGATGCACGCGTTTCTCCTCTTTCTTTGACTTATTATGCATTTTGCTTGGGAAATGGAAACTACACTGTAAATCTCCATTTTGCCGAGATAATGTTCACTGATGATAAAACATATAGCAGCCTGGGAAGGCGTGTGTTTGACATTTACATTCAGAGAAAGTTGGTGTTGAAGGATTTCAATATTGCAAAGGAAGCAGGGGGTGTTGGAAAGGCCATCATAAAAAATTTCACTGCTGTTGTGGCTAGTAATGCCTTGGAGATCCGCTTATATTGGGCTGGAAAAGGGACAACTACTATCCCCTATGGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTTGATCCGCCTCCACCATCAGCTAATGGTAATGGCATCCCCGTATGGGTTATCGTTGCAATTATTATAGCAGGAGCAATTATTATCATATTGGTATTCGGCATACTTTGGCGGAAGGGATGTTTTGGAAAGAAAATTTCAGTGGCTAAAGAAATAAAGGGCGTAGATTCTCAAACTTGCATATTCACATTAAGGCAAATAAAAGCAGCAACAAATGACTTTGATAGAGCCTTCAAGATTGGACAGGGAGGGTTTGGTCCAGTTTACAAGGGTGTCCTGTCAGACGGGACAACAGTAGCAGTTAAGAAACTTTCTGATAAATCAAAGCAAGGGAATCGTGAATTTATAAATGAGATTGGCATGATTTCTGCATTGCGACACCCTTATTTGGTTAGGCTTTATGGATTTTGTATGGAAGAGGATCAATTGTTGCTAATATATGAATACATGGAGAACAATAGCCTTGCACATGTTTTATTTGCAGATGCAAATAATGATGAAGAGAAAAGTCAATTGAGACTAGACTGGCAAACAAGGCAAAGGATTTGTGTTGGTATTGCTAAAGGTTTAGCTTACCTCCATGGAGAATCAAGACTGAAGATTGTTCATAGGGATATCAAAGCCACTAATGTGCTGCTGGATAAAGATCTCAACCCTAAGATATCCGATTTTGGTTTGGCCAAGCTTGATGAACAAGACAAAACCCACATAAGCACCAAAATAGCTGGCACTTATGGATATATGGCTCCTGAATATGCGATGCATGGTTGTCTGACCGACAAAGCCGATGTTTATAGTTTTGGAATTGTCACCTTGGAAATTGTTAGTGGGAAGAACAATATCCTTAGCCGGCCTATGGAAGATTTCTTCTCTCTTCTTGATTGGGCACATCTTTTGAGAGAAAAAGGCAATCTATTGGAATTTGTTGATTGGAGGTTGAGGGAAGAATTTAACAAAGAGGAGGTAATGGTCATGATCAATGTGGCTCTTCTTTGTACCAATGCCTCTCCAATGCTCAGGCCTACTATGGCTTCAGTGGTGAGCATGCTTGAAGGAGGAACTGTTGTTCCCGAGGTGGTGCCAGCCACAAGTGATGCATTGGATGATAAGAAAATTGAGATGATGAGACAACATTACCAACAAAGGGGAGAAATAGAGATAAGTGAGACTCAGGGACATAGCTTCTCGGTAGATGATACAACTGCATTTGTACGTAGCACGGATTCTTCTTACTGGAATGCGAGAAATTAA 3003 0.4136 MSFSLLFHLWLLASCFASLASGATLVEDEVKVLKEIGKRLGKKDWDFSVDPCSGERNWTSSGVQAKESINAVTCNCSFAEATICHVVSIVLKSQNLLGTLPAEFARLPYLQEIDLTLNYLNGTIPTQWSSLALVNISLYGNRLTGPIPKELGEITTLRSLVLEFNQFSGNLPPELGNLSQIEIMLLTSNNFTGELPATFAKLSTLKHIRLGDNQFSGAIPNFIQKWTSVEAMVIQGSGLSGPIPSGISLMKNLIDLRITDLNGPDSSFPQLDSMTNLKVLILRSCNIIGAVPENLGRLSNLQVLDLSYNKLSGQIPSSLAGPQQLNMILLTGNLLTGSLPGWIYRRPVVDCSFNNFSISSSEQLGCQQGGTNLFASSLNGNSLGNISCLPNTGCPNPWYSLHINCGGKQALSNGNQKYDDDSSETGPASFLLQGTNWALINTGHFFDSDRADYYTWSTTNKLAMDNAELYMDARVSPLSLTYYAFCLGNGNYTVNLHFAEIMFTDDKTYSSLGRRVFDIYIQRKLVLKDFNIAKEAGGVGKAIIKNFTAVVASNALEIRLYWAGKGTTTIPYGSVYGPLISAISVDPPPPSANGNGIPVWVIVAIIIAGAIIIILVFGILWRKGCFGKKISVAKEIKGVDSQTCIFTLRQIKAATNDFDRAFKIGQGGFGPVYKGVLSDGTTVAVKKLSDKSKQGNREFINEIGMISALRHPYLVRLYGFCMEEDQLLLIYEYMENNSLAHVLFADANNDEEKSQLRLDWQTRQRICVGIAKGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEQDKTHISTKIAGTYGYMAPEYAMHGCLTDKADVYSFGIVTLEIVSGKNNILSRPMEDFFSLLDWAHLLREKGNLLEFVDWRLREEFNKEEVMVMINVALLCTNASPMLRPTMASVVSMLEGGTVVPEVVPATSDALDDKKIEMMRQHYQQRGEIEISETQGHSFSVDDTTAFVRSTDSSYWNARN* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0870 1000 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 74 288 - -
Dod10g0870 1000 SMART serkin_6 658 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0870 1000 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 289 340 - -
Dod10g0870 1000 Gene3D - 399 586 - -
Dod10g0870 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Dod10g0870 1000 Gene3D Transferase(Phosphotransferase) domain 1 734 942 - -
Dod10g0870 1000 CDD STKc_IRAK 664 936 - -
Dod10g0870 1000 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 380 975 - -
Dod10g0870 1000 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 74 288 - -
Dod10g0870 1000 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 289 340 - -
Dod10g0870 1000 Gene3D Phosphorylase Kinase; domain 1 626 733 - -
Dod10g0870 1000 Pfam Protein tyrosine and serine/threonine kinase 663 934 IPR001245 GO:0004672|GO:0006468
Dod10g0870 1000 SUPERFAMILY Protein kinase-like (PK-like) 640 945 IPR011009 -
Dod10g0870 1000 ProSiteProfiles Protein kinase domain profile. 658 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0870 1000 Gene3D Ribonuclease Inhibitor 199 392 IPR032675 -
Dod10g0870 1000 SUPERFAMILY L domain-like 83 356 - -
Dod10g0870 1000 Pfam Leucine rich repeat 275 335 IPR001611 GO:0005515
Dod10g0870 1000 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 380 975 - -
Dod10g0870 1000 Pfam Malectin domain 400 583 IPR021720 -
Dod10g0870 1000 Gene3D Ribonuclease Inhibitor 42 198 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0870 Dod-Chr10 25569369 25582958 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0870 19 972 Receptor kinase-like Gene Family AT1G53420 52.435 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g0870 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0870 - - gmx:100786496 1353.19