Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0865 GATACTAAGGAGTTGCAATCTTAATGGCACAATACCTCCATATCTTGGAAAGATCGGAAAATTGAAAACATTAGACCTCAGTTTTAACAATTTAAATGGAGGAATTCCAAATTCCTTTGAAGAGCTAATAAATGTAACGGACAGGATATATTTAACTGGAAATTTTCTCACTGGACAATTGCCCACGTGGACAGAGAAATTTCAATCCATAGATCTTGCATATAACAACTTCAGCAATGAAAACTCAGCAGTGACATGTCGAGAGCCAAAGATGAATAGGAACCTGTTTGATAGTTTTTCAAATGGCAATAACACAGGACCCCTTCCATGTGGGAACAAAGAGCACTGTTTCAAAAGCCCTGAAGAACGATGCTCAAAATTGAATTGGCCAACAAGGCACAAGATTTGTGTTGGTATTGCAAGAGCTTTGGCTTTCCTGCATGAAGAATCAAGACTGAAAATTGTTCATAGGGACATAAAGGCTACCAATGTGCTGCTTGACAAAGGTCTAAACCCAAAAGTATCTGATTTTGGTTTGGCCAAGCTCAATGAGGAGGACACTACTCATATTAGTACCCGAATAGCTGGAACCTAG 595 0.3899 ILRSCNLNGTIPPYLGKIGKLKTLDLSFNNLNGGIPNSFEELINVTDRIYLTGNFLTGQLPTWTEKFQSIDLAYNNFSNENSAVTCREPKMNRNLFDSFSNGNNTGPLPCGNKEHCFKSPEERCSKLNWPTRHKICVGIARALAFLHEESRLKIVHRDIKATNVLLDKGLNPKVSDFGLAKLNEEDTTHISTRIAGT* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0865 197 SUPERFAMILY L domain-like 2 90 - -
Dod10g0865 197 Gene3D Ribonuclease Inhibitor 1 94 IPR032675 -
Dod10g0865 197 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 122 196 - -
Dod10g0865 197 Pfam Protein kinase domain 129 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0865 197 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 78 - -
Dod10g0865 197 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Dod10g0865 197 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0865 197 Gene3D Transferase(Phosphotransferase) domain 1 110 197 - -
Dod10g0865 197 Pfam Leucine Rich Repeat 20 42 IPR001611 GO:0005515
Dod10g0865 197 SUPERFAMILY Protein kinase-like (PK-like) 125 197 IPR011009 -
Dod10g0865 197 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 6 78 - -
Dod10g0865 197 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 122 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0865 Dod-Chr10 25304440 25315524 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0865 1 87 Receptor kinase-like Gene Family AT1G53420 52.222 1.11e-20 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g0865 Pkinase 7.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0865 - - twl:119986086 140.198