Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0861 ATGCTGACTTGTTCTGCCACCTCCATTATTTTCTCAGGGGACTTGTTCCATGTTTGGGGAACATCAGCTGTCTTAAACAGAAAGTTGGTGCTGAAGGATTTTGATATTGCAAAAGAAGCTGGAGGAGTTGGTAAGGTAATCATAAAAAAGTTTACTGCTACTGTGACTAGTGGTACCGTGGAGATCCGTTTACAGTGGGCTGGTAAAGGGACAACTGCTATCCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTAGATCCTGACTTTGTACCCCAAGTGGAAAAAGGAGGCATAAAAAATGGAAGTGGCAAAAATAATATTGGCATGCCTGTGTGGGCTGTTGCTGTAATTGTAGTTGCTGGAGCACTTGTTATTATCATGGCATTTGGCATAGTTTGGTGGAGATGTCTGGGACGAAAATGTTCACTGCAAAGAGAGCTACAGGGTTTAGATTTGAAAACTGGCTTATTTACATTAAGGCAAATCAAAGCAGCAACAAACAACTTTGATGATGCCTTCAAGATTGGAGAAGGAGGATTCGGTCCTGTTTACAAGGGTGTTCTTTCAGATGGCACAGTAATAGCAGTTAAGCAGCTTTCTTCTAAATCAAAACAAGGAAATCGTGAGTTCACAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCGTGTCTGGTTAAGCTCTATGGCTGTTGTATGGAGGAAGATCAGTTGATGTTGATATATGAATACATGGAAAACAATAGCCTTGCCCGAGCTTTATTTGCCCAAGACAAATGTCAATTGAAATTGGATTGGTCGACAAGGCGCAAGATTTGTATTGGTATTGCTAGAGGCTTGGCTTACCTCCATGGAGAGTCAAGGCTAAAGATAGTTCATAGGGACATCAAGGCCACTAATGTGTTGCTGGATAAAGATCTAAATCCAAAGATATCAGATTTCGGTTTGGCCAAGCTTGATGAAGAGGGCTATACTCACATAAGTACAAGAGTAGCTGGCACTTAG 1017 0.413 MLTCSATSIIFSGDLFHVWGTSAVLNRKLVLKDFDIAKEAGGVGKVIIKKFTATVTSGTVEIRLQWAGKGTTAIPFGSVYGPLISAISVDPDFVPQVEKGGIKNGSGKNNIGMPVWAVAVIVVAGALVIIMAFGIVWWRCLGRKCSLQRELQGLDLKTGLFTLRQIKAATNNFDDAFKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFTNEIGMISALQHPCLVKLYGCCMEEDQLMLIYEYMENNSLARALFAQDKCQLKLDWSTRRKICIGIARGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEGYTHISTRVAGT* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0861 338 Pfam Protein kinase domain 177 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0861 338 Gene3D - 21 91 - -
Dod10g0861 338 Pfam Malectin domain 25 87 IPR021720 -
Dod10g0861 338 Gene3D Phosphorylase Kinase; domain 1 143 248 - -
Dod10g0861 338 PANTHER KINASE-RELATED 8 338 - -
Dod10g0861 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Dod10g0861 338 SMART serkin_6 173 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0861 338 Gene3D Transferase(Phosphotransferase) domain 1 249 338 - -
Dod10g0861 338 SUPERFAMILY Protein kinase-like (PK-like) 159 338 IPR011009 -
Dod10g0861 338 ProSiteProfiles Protein kinase domain profile. 173 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0861 338 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0861 Dod-Chr10 25065038 25069154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0861 25 338 Receptor kinase-like Gene Family AT1G53420 62.857 4.29e-132 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g0861 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0861 - - gmx:100786496 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0861 10 25065038 25069154 Dod10g0861 10 25065038 25069154 ECH