Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0860 ATGGCTCCTGAATATGTAATGCATGGTTACTTGACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTACCTTGGAAATAGTTAGTGGGAAGAGCAACACCATGCAATGGCCAAAGGAAGAATGCTTCTCTCTTGTAGATTGGGTGCATCTCTTGAAACAAGAAGGTAATCTAATGGACCTAGTTGATGAGAGGTTGGGTGCACACTACAAAAAAGAGGAAGTATTGGTCATTATCAATGTGGCTCTTTTATGCACCCATGCTTCTCCAGTGCACAGGCCAACCATGGCTTCAGTGGTAAGCATGCTTGAAGGCGAAACTGTTGTTCAAGAGGCGGTGTCAGACACGAGTCAGGTATTCAGCGAAAAGAAGTTAGAGGTGATCTGA 387 0.4315 MAPEYVMHGYLTDKADVYSFGIVTLEIVSGKSNTMQWPKEECFSLVDWVHLLKQEGNLMDLVDERLGAHYKKEEVLVIINVALLCTHASPVHRPTMASVVSMLEGETVVQEAVSDTSQVFSEKKLEVI* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0860 128 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0860 128 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 117 - -
Dod10g0860 128 Gene3D Transferase(Phosphotransferase) domain 1 1 125 - -
Dod10g0860 128 SUPERFAMILY Protein kinase-like (PK-like) 1 108 IPR011009 -
Dod10g0860 128 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 117 - -
Dod10g0860 128 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0860 Dod-Chr10 25064116 25064834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0860 1 128 Receptor kinase-like Gene Family AT1G07650 54.688 2.95e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g0860 PK_Tyr_Ser-Thr 5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0860 - - mtr:MTR_2g073540 197.593