Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0859 ATGAAGTTCATGGCAATCTTCCTTCCACTATCCCTCTTCCCATTTTTCCTTCCATCCTTAGTTTTTGGAGCCACTCTACAACAAGAGGAAGTTCAAGCTCTGAAAGAGATAGGCAAGAGACTGGGGAAGAAGAACTGGGACTTCAGCGTAGATCCATGTAGTGGACAACGTAACTGGACATCGCTTACACAATTGAGCGGATTCGAGAATGCTGTAACTTGCGACTGTTCTTTCGCCAATCACACTCTTTGCCATGTAGTTAGCGTTTCTCTTTATGGAAATCGTCTAACTGGTCCAATTCCAAAGGAGCTAGGAGATATAACCACTCTCAGAAGTTTATTTTTAACTGGGAACCTTCTAACTGGATCACTGCCTGGTTGGATATATAAGCCTAATGATGTTTTATGTCCTGCTGGTGCCGTGTACTGTCATAAAAATGAAACACTTAACCTTGGAAACAGATTTAAAATTCTATATGGGCTTAGGAAAATCAGGGAAATATTTCTTGTTTGCCAAACACTGGGTGTCCTAAAGAGAAAGTTGGTGTTGAAGGATTTCAATATTGCAAAGGAAGCAGGGGGTGTTGGAAAGGCAATCATAAAAAACTTCACTGCTGTTGTGGCTAGTAATGCCTTGGAGATCCGCTTATATTGGGCTGGAAAAGGGACAACTACTATCCCATATGGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTTGATCCGGATTTTGTACCGCCTCCACCATCAGCTAACGGTAACGGCATCCCTGTAGGGGTTATTGTTGCAATTATTATAGCAGGAGCAATCATTATCATATTGGTATTTGGCATACTTTGGTGGAAGGGATGTTTTGGAAAGAAAATTTTAGTGGCTAAAGAACTAAAGGGCGTAGATTCTCAAACTTGCATGTTCACATTAAGGCAAATAAAAGCAGCAACAAATGACTTTGATAGAGCCTTCAAGATTGGACAGGGAGGGTTTGGTCCAGTTTACAAGGGTGTCCTGTCAGATGGCACAATAGTAGCAGTTAAGAAACTTTCTGATAAATCAAAGCAAGGGAATCGTGAATTTATAAATGAGATTGGCATGATTTCTGCATTGCGACACCCTTATTTGGTTAAGCTCTATGGCTTTTGCATGGAAGAGGATCAATTGTTGCTAATATATGAATACATGGAGAACAATAGCCTTGCACATGCTTTATTTGATGCAAATAATGATGAAGGGAAAAGTCAATTGAGACTAGACTGGCAAACAAGGCAAAGGATTTGTGTTGGTATTGCTAAAGGCTTAGCTTACCTCCATGGAGAATCAAGACTGAAGATTGTTCATAGGGATATCAAAGCCACTAATGTGCTGCTGGATAAAGATCTCAACCCTAAGATATCTGATTTTGGTTTAGCCAAGCTTGATGAACAGGACAAAACCCACATAAGCACCAGAGTAGCTGGCACTTATGGATATATGGCTCCTGAATATGCGATGCATGGTTATTTGACCGACAAAGCCGATGTTTATAGCTTTGGAATTGTCGCCTTGGAAATTGTCAATGGGAAGAGCAATACCCTTAGCCAGTCTGTGGAAGATTTCTTCTCTCTTCTTGATTGGGCACATCTTTTGAAAGAAAAAGGCAATCTATTGGAACTTGTTGATTGGAGGTTGGAGGAAGACTTTAACAAAGAGGAAGTAATGGTCATGATCAATGTGGCTCTTCTTTGTACCAATGCCTCTCCAATGCCCAGGCCTACTATGGCTTCAGTGGTAAGCATGCTTGAAGGAAGAACTGTTGTTCCCGAGGTGGTGCCAGCTACAGGCGATTCATTGGATGAGAGGAAACTTGAGATGATGAGACAACGTTACCAACAAAGGGGAGAAAAAGAGATAAGTGAGATTCAGAGCCATAGTGTGTCATTAGATGATTCAACTGCATTTATACATAGCACGGATTCTTCTTAG 1962 0.4098 MKFMAIFLPLSLFPFFLPSLVFGATLQQEEVQALKEIGKRLGKKNWDFSVDPCSGQRNWTSLTQLSGFENAVTCDCSFANHTLCHVVSVSLYGNRLTGPIPKELGDITTLRSLFLTGNLLTGSLPGWIYKPNDVLCPAGAVYCHKNETLNLGNRFKILYGLRKIREIFLVCQTLGVLKRKLVLKDFNIAKEAGGVGKAIIKNFTAVVASNALEIRLYWAGKGTTTIPYGSVYGPLISAISVDPDFVPPPPSANGNGIPVGVIVAIIIAGAIIIILVFGILWWKGCFGKKILVAKELKGVDSQTCMFTLRQIKAATNDFDRAFKIGQGGFGPVYKGVLSDGTIVAVKKLSDKSKQGNREFINEIGMISALRHPYLVKLYGFCMEEDQLLLIYEYMENNSLAHALFDANNDEGKSQLRLDWQTRQRICVGIAKGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEQDKTHISTRVAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVNGKSNTLSQSVEDFFSLLDWAHLLKEKGNLLELVDWRLEEDFNKEEVMVMINVALLCTNASPMPRPTMASVVSMLEGRTVVPEVVPATGDSLDERKLEMMRQRYQQRGEKEISEIQSHSVSLDDSTAFIHSTDSS* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0859 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Dod10g0859 653 SUPERFAMILY Protein kinase-like (PK-like) 301 601 IPR011009 -
Dod10g0859 653 Gene3D Phosphorylase Kinase; domain 1 288 393 - -
Dod10g0859 653 Pfam Protein kinase domain 322 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0859 653 Gene3D Ribonuclease Inhibitor 25 157 IPR032675 -
Dod10g0859 653 CDD STKc_IRAK 324 595 - -
Dod10g0859 653 SUPERFAMILY L domain-like 58 129 - -
Dod10g0859 653 Pfam Malectin domain 177 239 IPR021720 -
Dod10g0859 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 268 635 - -
Dod10g0859 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 85 125 - -
Dod10g0859 653 SMART serkin_6 318 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0859 653 ProSiteProfiles Protein kinase domain profile. 318 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0859 653 Gene3D Transferase(Phosphotransferase) domain 1 394 601 - -
Dod10g0859 653 Gene3D - 176 243 - -
Dod10g0859 653 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 268 635 - -
Dod10g0859 653 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 85 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0859 Dod-Chr10 25052147 25062061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0859 177 648 Receptor kinase-like Gene Family AT1G53420 58.403 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g0859 Pkinase 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0859 - - ccaj:109799273 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0859 10 25052147 25062061 Dod10g0859 10 25052147 25062061 ECH