Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0849 ATGGTTGGATTCCAGAGTGAGCATATGCCTGGGAACAAGTGTAACGGTAATTCTAATAATTATCCAGGTCGTGTTGAGCGACTTGTGAGAAGAAGAGAACTAAGAAAAAGCAGCAGGGCATCTCTTTCTGTTGATTGTCCTGATAATAATATTAAAATTAATGGGGTGGCTGAGTCTTTTGAGCATGACCCGCGCTTAAGAGAAGAAAATAACTCGCGTGCTTCCCATGTTGAACAATTCCTTGAACGGGTGGCAGCAGCTGGTGAGAGGGATGACGGGAAGCCTTTTAGACAACGACTTTTGGTGGTGGCCAATAGGCTTCCGGTCTCAGCAGTTAGGAGAGGTGAGGATTCATGGTCTTTGGAGATAAGTGCTGGTGGCTTGGTAAGCGCTCTTTTAGGTGTGAAGGAATTTGAGGCCAGGTGGATAGGTTGGGCTGGTGTCAATGTACCAGATGAGATTGGACAGAAGGCACTTACTAAAGCATTGGCTGAAAAGAGGTGTATCCCCGTGTTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGCTATTGCAACAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGAACGCCTAGCTACCACACGTAGTTTCCAGTCTCAGTTTGCAGCATATCAGAAAGCAAATCAAATGTTTGCAGATGTCGTAAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCGCAATGCTTAAAGAATTATAATAGAAAAATGAAAGTTGGCTGGTTTCTACACACCCCATTTCCATCCTCTGAAATTCACAGGACACTGCCATCTCGCTCAGAGCTCCTGCATGCTGTTCTCGCTGCTGACTTAGTTGGTTTTCACACCTATGATTATGCAAGACATTTTGTTAGTGCATGCACTCGCATCCTTGGACTTGAGGGCACACCTGAAGGGGTTGAGTATCAAGGGAAGCTGACTCGAGTTGCTGCATTTCCAATTGGTATTGACTCAGAACGTTTCATACGTGCACTTGACCTTCCTCAAGTAAAGGATCACATAAAAGAATTACAAGAAAGATTCAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAATTTTTAGAAGAGAATCCTAGTTGGCGTGATAAAGTTGTTCTGCTTCAAATTGCAGTGCCAACTAGAACGGATGTTCCTGAGTATCAAAAGCTTACAAGCCAAGTCCATGAAATTGTTGGCCGCATCAATGGCAGATTTGGAACACTGACGGCTGTTCCAATACACCACCTGGATCGCTCTCTTGACTTTCATGCATTATGTGCTTTGTATGCTGTTACAGATGTAGCACTTGTCACATCGTTGAGGGATGGAATGAACCTTGTCAGTTATGAGTTTGTGGCCTGCCAAGATATAAAGAAGGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCACAGTCCCTTGGTGCTGGGGCAATTCTGGTCAACCCCTGGAACATCACAGAAGTTGCTGCTGCAATTGCCAAGGCTCTGAATATGCAACCTGCAGAAAGAGAGAAGAGACATAAGCATAACTATTATCATGTAAAAACACACACTGCACAGGAATGGGCAGAAACTTTTGTAAGCGAGCTAAATGATACCGTTGTTGAGGCACAGCTAAGGACAAAACAAGTTCCACCCCAACTCCCAACTGAGAAAGCAATTGAACGCTACTTGCAGTCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTTTAACTGAACCAGTTGAGAAAAAAGGTGATCAGTATAAAGAAATGGAGCTCACAGTGCATCCAGAACTGAAGCAACCATTGACAGAACTTTGCAGTGACCCAAAGACCACAATTGTTTTGCTTAGTGGAAGTCGTAGAAAAGTTCTAGATGAAAACTTTAAAGAATATGACATGTGGCTGGCAGCAGAGAATGGGATGTTTTTAAAACCTTCAAAGGGTGAATGGATGACAACAATGCCAGAGCAGCTGAATATGGAATGGGTTGACAGCTTGAAGCTTGTTTTTGAGTATTTCACAGAAAGAACACCTCGGTCAACCTTTGAAGAAAGGGAAGCTTCACTTGTGTGGAACTACAAACATGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACTGGTCCAATTTCTAATGCATCCCTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAGATGCGAGCTGCTGGGGTTACAAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTCCACAGTAAATCCATGACAACCCCAATTGATTATGTTCTGTGTATAGGACATTTTCTAGCAAAGGATGAAGATATATATGCCTTTTTTGAGCCGGAGCTTCCTTGTGCTGGCTTGGCTCTCCCACGAAGTAAGGTAACTGATGGAATTAAGCTTCCTGTTGAGAGGATACCGAGTTTTAAGATCCCGGCTAGTAAGAATGGAGCAAAGTCATCCCAAAATAAGGCACAAAGGCCTCTGCCAAATTCTGAGAAGAAAACAACTAATCATGTCTGCCGTGGACCGCGGCGGCCAGCTCCTGAAAAGATCTCTTGGAATATTCTCGACCTTAAGAAGGAGAATTACTTCTCTTGTGCTGTTGGACGAACTCAAACAAATGCTGGGTATACCCTTGGATCTTCAGATGATGTCGTTGCATTTCTGAAGGAACTAGCGGGTGCTTCTTCAAACTCTGTGTTACTTAGTACCTGA 2814 0.4339 MVGFQSEHMPGNKCNGNSNNYPGRVERLVRRRELRKSSRASLSVDCPDNNIKINGVAESFEHDPRLREENNSRASHVEQFLERVAAAGERDDGKPFRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEERLATTRSFQSQFAAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPQCLKNYNRKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEYQGKLTRVAAFPIGIDSERFIRALDLPQVKDHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDIKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMQPAEREKRHKHNYYHVKTHTAQEWAETFVSELNDTVVEAQLRTKQVPPQLPTEKAIERYLQSTNRLLILGFNGTLTEPVEKKGDQYKEMELTVHPELKQPLTELCSDPKTTIVLLSGSRRKVLDENFKEYDMWLAAENGMFLKPSKGEWMTTMPEQLNMEWVDSLKLVFEYFTERTPRSTFEEREASLVWNYKHADVEFGRLQARDMLQHLWTGPISNASLEVVQGSRSVEMRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLAKDEDIYAFFEPELPCAGLALPRSKVTDGIKLPVERIPSFKIPASKNGAKSSQNKAQRPLPNSEKKTTNHVCRGPRRPAPEKISWNILDLKKENYFSCAVGRTQTNAGYTLGSSDDVVAFLKELAGASSNSVLLST* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0849 937 Gene3D - 599 780 IPR023214 -
Dod10g0849 937 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 99 564 IPR012766 GO:0003825|GO:0005992
Dod10g0849 937 CDD GT20_TPS 99 564 IPR001830 GO:0003824|GO:0005992
Dod10g0849 937 SUPERFAMILY HAD-like 596 926 IPR036412 -
Dod10g0849 937 Gene3D Glycogen Phosphorylase B; 346 549 - -
Dod10g0849 937 CDD HAD_TPP 597 814 - -
Dod10g0849 937 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 34 926 - -
Dod10g0849 937 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 98 567 - -
Dod10g0849 937 MobiDBLite consensus disorder prediction 1 23 - -
Dod10g0849 937 MobiDBLite consensus disorder prediction 846 869 - -
Dod10g0849 937 Gene3D - 686 766 - -
Dod10g0849 937 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 34 926 IPR001830 GO:0003824|GO:0005992
Dod10g0849 937 Pfam Trehalose-phosphatase 602 814 IPR003337 GO:0003824|GO:0005992
Dod10g0849 937 Pfam Glycosyltransferase family 20 99 564 IPR001830 GO:0003824|GO:0005992
Dod10g0849 937 MobiDBLite consensus disorder prediction 844 879 - -
Dod10g0849 937 TIGRFAM T6PP: trehalose-phosphatase 595 809 IPR003337 GO:0003824|GO:0005992
Dod10g0849 937 Gene3D Glycogen Phosphorylase B; 91 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0849 Dod-Chr10 24392637 24417805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0849 9 931 Trehalose Biosynthesis Gene Families AT1G78580 76.346 0.0 1465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0849 K16055 - gmx:100789554 1614.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0849 10 24392637 24417805 Dod10g0849 10 24392637 24417805 ECH