Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0837 ATGGAAGGAGACACTGTCACTTTCTTTGATCCTATGCATCATGATGCCACTCAAATTGCAGTGGTGCCAAAGGGGCATGTTTGGATTCAAGAGGATAACATTTATGTGTCACATGATTCAAGGCATTTTGGTCCTGTTCCTTATGGCCTTATACAAGGAAAAGTTTTTTTTAGGGGCATGTTATGTGGTAAAGACTTCATTATCTACATGGAAAAATTGGTCCTTATGGTTAATTAG 237 0.384 MEGDTVTFFDPMHHDATQIAVVPKGHVWIQEDNIYVSHDSRHFGPVPYGLIQGKVFFRGMLCGKDFIIYMEKLVLMVN* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0837 78 CDD S26_SPase_I 3 55 IPR019533 GO:0004252|GO:0006465
Dod10g0837 78 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 58 - -
Dod10g0837 78 Pfam Signal peptidase, peptidase S26 15 58 IPR019533 GO:0004252|GO:0006465
Dod10g0837 78 Gene3D Umud Fragment, subunit A 1 69 - -
Dod10g0837 78 SUPERFAMILY LexA/Signal peptidase 2 59 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0837 Dod-Chr10 24088062 24089841 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0837 1 58 MADS-box Gene Family AT1G29960 54.237 2.12e-16 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0837 K09647 - gmx:100527597 109.383