Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0828 ATGAGGAAGTTCCTGGTTATAGCCTTATCAGTAACCATATGCTTCATAGCTTTTGTGATATCAAAGATCTTTATCTCAGTACTCCTCTACAAAAGATGGAAAAGAAAGCACATAATTTATGAAGATGGAGGGAAGATGGTAATATTTAGGTCCTCAGTGCTGCAGTCTCTCACATCTGATGTGGTCTTACAGAAGACACAGAAACTGACCAATAAGGACATAATTGGCTCTGGTGGTTATGGAATAGTTTATAAGCTGAGACTAAATGAATCAACAGCCTTTGCTGTGAAAAGGCTAAACCGAGGAACTGCAGAGAGGGACAAAGGTTTTGAGAGAGAGCTGGAAGCAATGGCAGACATAAAGCACCGCAATATTGTGACTCTTCATGGATATTACACTGCACCACACTACAATCTTCTCATATATGAGCTAATGCCAAATGGCAGCTTGGATTCCGTTTTACATGGGAGATCAATGGACAAGAAGCATTTGGATTGGTCAACAAGATACAGAATAGCTGTAGGGGCAGCTAGAGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGATATCAAATCAAGCAATATATTGTTGGATCAAAACATGGAGGCTCGAATTTCTGATTTTGGATTAGCCGCATTGATGGACCCAAATAAAACCCATGTTTCAACAATTGTGGCTGGAACTTTTGGATACTTGGCACCTGAATATTTTGATACAGGAAAAGCAACAGTGAAAGGGGATGTTTACAGCTTTGGAGTTGTGTTACTGGAGCTTTTAACTGGGAAGAAACCCAGTGATGAAGCATTTATAGAAGAGGGAACCAAGCTTGTCACATGGGTGAAGGCTGTTGTTCAAGAGAAGAAAGAGGACTTGGTTCTTGATACTGGCTTAGGATCTTGTCCAATGCAAGAGGTCAACAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGACCCCTTGAAGAGGCCAACCATGGCTGAGGTTGTCAACTTGTTTGAAAAAATAGTGTTGGACAAACATGTAACATCCTGA 1053 0.4074 MRKFLVIALSVTICFIAFVISKIFISVLLYKRWKRKHIIYEDGGKMVIFRSSVLQSLTSDVVLQKTQKLTNKDIIGSGGYGIVYKLRLNESTAFAVKRLNRGTAERDKGFERELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMPNGSLDSVLHGRSMDKKHLDWSTRYRIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARISDFGLAALMDPNKTHVSTIVAGTFGYLAPEYFDTGKATVKGDVYSFGVVLLELLTGKKPSDEAFIEEGTKLVTWVKAVVQEKKEDLVLDTGLGSCPMQEVNKVFNIAMMCLEPDPLKRPTMAEVVNLFEKIVLDKHVTS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0828 350 Gene3D Phosphorylase Kinase; domain 1 44 144 - -
Dod10g0828 350 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 344 - -
Dod10g0828 350 PANTHER BNAA07G39120D PROTEIN 2 344 - -
Dod10g0828 350 SUPERFAMILY Protein kinase-like (PK-like) 51 339 IPR011009 -
Dod10g0828 350 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Dod10g0828 350 Gene3D Transferase(Phosphotransferase) domain 1 145 348 - -
Dod10g0828 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Dod10g0828 350 Pfam Protein kinase domain 71 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0828 350 ProSiteProfiles Protein kinase domain profile. 69 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0828 350 SMART serkin_6 69 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0828 Dod-Chr10 23839480 23841625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0828 3 344 Receptor kinase-like Gene Family AT2G35620 44.669 3.15e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Dod10g0828 Pkinase 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0828 - - ahf:112703495 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0828 10 23839480 23841625 Dod10g0828 10 23839480 23841625 ECH