Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0825 ATGCTCCTAACCCTAAACCTCGCCGGCGAAGTCGTTTTGGCGGACCACGTGTCTCAGCGGCTTGGGAAGGTTGGGCATGGCGGCTTGGTTCTGGTTCGGTCACCCTCCGTCCCTAACCAGTGCCTCACGAAGCGGATTGTGGCCATGGAAGGAGACACTGTCACTTACTTTGATCCTATGCGTGATGATGCCACTCAAATTGCAGTGATTAATTTTGATGCATTGATAGTGCCATTTAATCATGTATTATCGCATGAGTGA 261 0.5057 MLLTLNLAGEVVLADHVSQRLGKVGHGGLVLVRSPSVPNQCLTKRIVAMEGDTVTYFDPMRDDATQIAVINFDALIVPFNHVLSHE* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0825 86 Pfam Signal peptidase, peptidase S26 8 57 IPR019533 GO:0004252|GO:0006465
Dod10g0825 86 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 70 - -
Dod10g0825 86 SUPERFAMILY LexA/Signal peptidase 4 58 IPR036286 -
Dod10g0825 86 Gene3D Umud Fragment, subunit A 1 75 - -
Dod10g0825 86 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0825 Dod-Chr10 23816903 23817232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0825 1 83 MADS-box Gene Family AT1G29960 34.524 4.32e-13 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0825 K09647 - gmx:100527597 92.0485