Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0813 ATGCTCCCAACCCTAAACCTCGCCGGCGACGTCGTTTTGGCGGACCACGTGTCTCAGCGGCTTGGGAAGGTTGGGCATGGCGACTTGGTTCTGGTTCGGTCACCCTCCGTCCCTAACCAGTGCCTCGCGAAGCGGATTGTGGCCATGGAAGGAGACACTATCACTTACTTTGATCCTATGCGTGATGACGCCACTCAAATTGCAGTGATGTGCCAAAGGGGCATGTTTAGATTCAAGGGGATAACATTTATGCATCTACATGATTCAAGCCATTTTGGTCCTGTTCCTTATGGCTTTATACAAGGAAAAGTCTTTTTTGGGGTTTGGCCACTTGATAGCTTTGGATTGCTAGGTCAATGA 360 0.4972 MLPTLNLAGDVVLADHVSQRLGKVGHGDLVLVRSPSVPNQCLAKRIVAMEGDTITYFDPMRDDATQIAVMCQRGMFRFKGITFMHLHDSSHFGPVPYGFIQGKVFFGVWPLDSFGLLGQ* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0813 119 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 117 - -
Dod10g0813 119 CDD S26_SPase_I 1 104 IPR019533 GO:0004252|GO:0006465
Dod10g0813 119 Pfam Signal peptidase, peptidase S26 1 57 IPR019533 GO:0004252|GO:0006465
Dod10g0813 119 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 1 117 - -
Dod10g0813 119 SUPERFAMILY LexA/Signal peptidase 1 117 IPR036286 -
Dod10g0813 119 Gene3D Umud Fragment, subunit A 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0813 Dod-Chr10 23684913 23688763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0813 1 118 MADS-box Gene Family AT1G29960 42.017 4.53e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0813 K09647 - gmx:100527597 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0813 10 23684913 23688763 Dod10g0813 10 23684913 23688763 ECH