Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0779 ATGGCTTCAGTCCAAAGCTTCAACTTTGATACCCAAATCCCATCAGAGCTCCTCATAGCTCAAATCATGCAACTTCATGCAAGCATTTCTAACCTAGAATCCCTTAGGCCCTCTAAGCAAGTAAATAGCCTCTTGACTCACCTGGTGAAGCTTTGCACCCTCCCTTCATCCATTGACATTGAGGCCTTACCCCAAGATGTGAAGAGCATTCGTGAGAGCCTCATTAACCTTTGTGGCTGTGCTGAAGGGCTCTTAGAGCTTGAATTCTCAACTTTTGTAAGCCATACTCCAAACCCTTTGAACAACCTCTCTCTCTTCCCTTACTATGGCAACTATGTCCAACTAGCAAACTTGGAGAACAAGATCCTCAAAGACAGTGGTGTGTTGCATCCAAAGAAAGTAGCCTTTGTTGGGTCAGGACCATTGCCACTCACTTCAATCATAATGGCCATTCACCACATGGAGAACACTCACTTTGATAACTTTGACATTGATGAGAAGGCAAATGAGGTGGCTAGGAAGATTGTTGCCTCAGATAAAGAACTTGACAAGAGGATGAAGTTTGAAACACAAGACATCATGGATGTTAAAGAGAGGTTGGGGGAATATGATTGCATATTTTTGGCAGCACTTGTGGGAATGAGCAGAGAAGCGAAAGTGAAGATTTTGGGGCACATAAGGAAGTACATGAAGGAGGGAGGTGCTTTACTTGTGAGGAGTGCAAAAGGGGCTAGAGCTTTCTTGTACCCTATTGTTGAGGAGCATGACATGGTGGATTTTGAGGTGCTTACCATCTTTCATCCCACAAATGATGTGATCAACTCAGTTGTTCTTCTTCGCAAGCCTAAAGCTTAG 855 0.4386 MASVQSFNFDTQIPSELLIAQIMQLHASISNLESLRPSKQVNSLLTHLVKLCTLPSSIDIEALPQDVKSIRESLINLCGCAEGLLELEFSTFVSHTPNPLNNLSLFPYYGNYVQLANLENKILKDSGVLHPKKVAFVGSGPLPLTSIIMAIHHMENTHFDNFDIDEKANEVARKIVASDKELDKRMKFETQDIMDVKERLGEYDCIFLAALVGMSREAKVKILGHIRKYMKEGGALLVRSAKGARAFLYPIVEEHDMVDFEVLTIFHPTNDVINSVVLLRKPKA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0779 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Dod10g0779 284 Gene3D Vaccinia Virus protein VP39 16 283 IPR029063 -
Dod10g0779 284 CDD AdoMet_MTases 162 238 - -
Dod10g0779 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Dod10g0779 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 240 IPR029063 -
Dod10g0779 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Dod10g0779 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0779 Dod-Chr10 23003174 23004353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0779 15 281 Nicotianamine Synthase Gene Family AT5G56080 52.030 7.12e-93 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0779 K05953 - gmx:100819726 464.151