Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0737 ATGGCGAAACCAGGGCGAGGCCGCCGCTCACCGCCGTCGGGGTCCATCTCCGGGTCCTCCTCCCGCTCACGCTCCTCCTCTCCCTCCGACTCTCGCTCCTCCTCCCGCTCCCGCTCTCCCTCTCGCTCCAGATCCAACTCTTCCTCCTCTTCCTCACCTTCCCGCTCCTCCCGCAGCCCCAGTCTCTCCCCTCCCCCTCCTCGCCGGAGAAGTCCTGGTGAAGCAGCTAGGCGAGGTCGATCTCCTCCACCTCAGTCTAAAAGAACTTCTCCTCCTCCAAGGAAACCTTCTCCTGTACGCGAATCACTTGTTCTTCATGTAGAAAAGCTCAGCAGGAATGTCAACGAAGGCCATTTGAAAGAAATATTTAGTAACTTTGGCGAGGTGGTAAATGTCGAGTTGGCAATGGATCGAACTGTTAATCTTCCCAAAGGATATGGGTATGTGCAATTCAAGACAAGAGCTGAGGCTGAAAAAGCGTTATTGTACATGGATGGTGCCCAAATAGATGGGAATGTCGTTAAGGCAAGATTTACTCTGCCTCCAAGACAGAAAGTTTCACCTCCTCCAAAGGCTTCAGCTGTTGCTTCGAAGAGGGATACTCCTAGGACTGATAATGCTAGTGCAGATGTTGAAAAGGATGGGCCAAAGCGGCAAAGAGAATCTCCTCGGAGAAAACCTCCTCCCTCTCCACGACGGAGATCTCCTGTGCCTCGAAGAGCTGTATCTCCAAGGCGACTAGATTCTCCTCGTCGTCGTGCAGATTCTCCTGTTCGTCGTCGATTAGACTCTCCTTATCGTCGTGGAGACACACCTCCTAGGAGGAGGCCTGTGTCTCCTGGAAGAGGTCGCTCTCCATCTCCACCAAGGCGCCCTAGATCCCCTGCAAGGGTATCACCTAGAAGGTTGCGTGGAAGCCCAGGTCGCAGACGTTCTCCTCCTCCTCCTCCTCTAAGGCGCCGTTCACCACCACCTAGGCGAGCTCGTAGTCCTCCTAGAAGGTCTCCAATCAGAAGGCGCAGTCGCTCTCCAATACGTAGGTCTGCACGCTCAAGGTCATTCTCACCTCGAAGAGGTCGACCACCTATCAGACGTGGGAGATCTTCATCCTACTCTGATTCACCAAGTCCACGCAAGGTGTCTCGGAGATCAAAGAGTCGCAGTCGCAGCCCAAGAAGGCCTTTGAGAGGAAGAGGCAGTAGCAACAGCAGCAGCAGCAGTTCGCCGCCCCCACCCCTACCCCCACCCCCACCCCGCAAACCCTAG 1266 0.5521 MAKPGRGRRSPPSGSISGSSSRSRSSSPSDSRSSSRSRSPSRSRSNSSSSSSPSRSSRSPSLSPPPPRRRSPGEAARRGRSPPPQSKRTSPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVNVELAMDRTVNLPKGYGYVQFKTRAEAEKALLYMDGAQIDGNVVKARFTLPPRQKVSPPPKASAVASKRDTPRTDNASADVEKDGPKRQRESPRRKPPPSPRRRSPVPRRAVSPRRLDSPRRRADSPVRRRLDSPYRRGDTPPRRRPVSPGRGRSPSPPRRPRSPARVSPRRLRGSPGRRRSPPPPPLRRRSPPPRRARSPPRRSPIRRRSRSPIRRSARSRSFSPRRGRPPIRRGRSSSYSDSPSPRKVSRRSKSRSRSPRRPLRGRGSSNSSSSSSPPPPLPPPPPRKP* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0737 421 MobiDBLite consensus disorder prediction 407 421 - -
Dod10g0737 421 SMART rrm1_1 104 177 IPR000504 GO:0003723
Dod10g0737 421 MobiDBLite consensus disorder prediction 1 101 - -
Dod10g0737 421 SUPERFAMILY RNA-binding domain, RBD 90 189 IPR035979 GO:0003676
Dod10g0737 421 CDD RRM_RNPS1 105 177 IPR034201 -
Dod10g0737 421 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 103 181 IPR000504 GO:0003723
Dod10g0737 421 MobiDBLite consensus disorder prediction 12 58 - -
Dod10g0737 421 MobiDBLite consensus disorder prediction 180 421 - -
Dod10g0737 421 Gene3D - 15 188 IPR012677 -
Dod10g0737 421 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 1 402 - -
Dod10g0737 421 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 107 175 IPR000504 GO:0003723
Dod10g0737 421 MobiDBLite consensus disorder prediction 244 277 - -
Dod10g0737 421 MobiDBLite consensus disorder prediction 203 228 - -
Dod10g0737 421 MobiDBLite consensus disorder prediction 322 364 - -
Dod10g0737 421 PANTHER BNAA09G56240D PROTEIN 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0737 Dod-Chr10 22450155 22456883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0737 100 172 Eukaryotic Initiation Factors Gene Family AT1G34140 36.986 2.24e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0737 K14325 - gmx:100783566 291.197