Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0719 ATGGTGAAGTTCACAGCTGAAGAGCTTCGTCGTATTATGGACCATAAGCACAACATTCGTAACATGTCTGTGATTGCTCATGTTGATCACGGAAAATCCACTCTCACTGATTCTCTTGTGGCTGCTGCTGGAATTATTGCACAAGAAGTGGCAGGTGATGTCCGCATGACTGATACCCGTGCAGATGAAGCTGAGCGTGGTATTACAATCAAGTCTACTGGTATCTCTCTCTACTATGAAATGCCTGATGAAGCTCTCAAGAGTTACAAAGGAGACCGCCAAGGCAATGAGTATCTCATCAATCTCATTGACTCCCCTGGGCACGTGGATTTCTCATCTGAGGTTACTGCTGCACTTCGCATTACTGATGGAGCTCTAGTGGTGGTGGATTGTGTTGAAGGTGTCTGTGTGCAAACTGAAACTGTGTTGCGACAGGCCCTGGGAGAAAGAATTAGGCCTGTTCTGACTGTTAACAAGATGGACAGATGTTTCCTTGAGCTTCAGGTCGATGGAGAGGAGGCTTACCAGACATTCCAGAGGGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAAGATCCACTACTCGGTGATTGTCAGGTCTATCCTGAGAAAGGAACAGTTGCTTTTTCTGCTGGTTTGCATGGCTGGGCCTTTACCCTGACCAACTTTGCAAAAATGTACTGCCTCAAAATTTGGTGTTGA 708 0.4576 MVKFTAEELRRIMDHKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMPDEALKSYKGDRQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDCQVYPEKGTVAFSAGLHGWAFTLTNFAKMYCLKIWC* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0719 235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 230 IPR027417 -
Dod10g0719 235 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 17 235 IPR000795 GO:0003924|GO:0005525
Dod10g0719 235 Gene3D - 3 234 IPR027417 -
Dod10g0719 235 PRINTS GTP-binding elongation factor signature 117 128 IPR000795 GO:0003924|GO:0005525
Dod10g0719 235 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Dod10g0719 235 PRINTS GTP-binding elongation factor signature 101 111 IPR000795 GO:0003924|GO:0005525
Dod10g0719 235 PRINTS GTP-binding elongation factor signature 153 162 IPR000795 GO:0003924|GO:0005525
Dod10g0719 235 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Dod10g0719 235 TIGRFAM small_GTP: small GTP-binding protein domain 19 177 IPR005225 GO:0005525
Dod10g0719 235 CDD EF2 20 231 - -
Dod10g0719 235 PANTHER OS01G0742200 PROTEIN 1 231 - -
Dod10g0719 235 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 IPR031157 -
Dod10g0719 235 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 231 - -
Dod10g0719 235 Pfam Elongation factor Tu GTP binding domain 17 221 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0719 Dod-Chr10 21817670 21819031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0719 1 233 Eukaryotic Initiation Factors Gene Family AT1G56070 93.991 1.20e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0719 K03234 - rcu:8263373 441.039