Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0712 ATGGGAGTTAATGAAGATTTCATCAAGGAAGATGAGCTTGAAGTGGAGGATGATGTTCCACTTCCGGGGTTTCGCTTCCACCCCACAGATGAAGAGCTTGTTAGTTTCTACCTTCGAAGGAAGCTTGACAAGAAACCAATCAGTATTGAACTCATCAAGCAGATTGATATCTACAAATATGATCCTTGGGATCTTCCAAAAGCCAGTGGCAGTGGAGGAGATAAAGAAGGGTACTTTTTTTGCAAAAGAGGGAGGAAGTATAGGAACAGCATAAGGCCTAATAGAGTCACTGGGTCTGGGTTCTGGAAAGCAACTGGGATAGACAAGCCAGTGTACTCACATGGAGGAGAAGGCAATGACTGCATTGGACTCAAGAAGACACTGGTTTACTACCGTGGCAGTGCAGGCAAAGGAACCAAAACTGATTGGATGATGCACGAGTTTCGCCTTCCCTCCTGTAATGACACCACCAACACAAACATTGCTAACACCAAGAATAATGCAGATGTTGCACAAGAAGCTGAAATTTGGACATTGTGTCGAATTTTCAAAAGAAACGTGTCACCAAGAAAGCACACATCAGACATGAGACAAATAGCAGCTAAGCGTTCTCATTCCACACATGACAAGTGCACTACCAGAATAAGCAGTACTGTGGAGTGTAATAACACTCGCCAAGAGTCATACATCAACTTTGGTGCAAGCCTTGGCCATATCCATCACCATTATCAAAATGAACAGAAGCCTGTGATTAACTACAACACATGCAGCAGTGATCAAAGGAATCATCATCAGTTTCATCATGTGGCTCAGTTCAACCACCCTCCAGTGGCACCACCACCACAACAACAACAACCTCAAACAATGACAGTACCATCTTCTAACTTCTGGATTAATCCTGCTGCTGCCACCAACGACTTATTCTCATTTGAGAACTGGGATGAGCTTGGATCGGTTGTGAAGTTTGCTGTTGATTCGCCTAGCTTGTAA 990 0.4384 MGVNEDFIKEDELEVEDDVPLPGFRFHPTDEELVSFYLRRKLDKKPISIELIKQIDIYKYDPWDLPKASGSGGDKEGYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHGGEGNDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSCNDTTNTNIANTKNNADVAQEAEIWTLCRIFKRNVSPRKHTSDMRQIAAKRSHSTHDKCTTRISSTVECNNTRQESYINFGASLGHIHHHYQNEQKPVINYNTCSSDQRNHHQFHHVAQFNHPPVAPPPQQQQPQTMTVPSSNFWINPAAATNDLFSFENWDELGSVVKFAVDSPSL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0712 329 PANTHER TRANSCRIPTION FACTOR JUNGBRUNNEN 1-LIKE 12 327 - -
Dod10g0712 329 Gene3D NAC domain 29 188 IPR036093 GO:0003677|GO:0006355
Dod10g0712 329 Pfam No apical meristem (NAM) protein 22 150 IPR003441 GO:0003677|GO:0006355
Dod10g0712 329 ProSiteProfiles NAC domain profile. 20 185 IPR003441 GO:0003677|GO:0006355
Dod10g0712 329 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 327 - -
Dod10g0712 329 SUPERFAMILY NAC domain 20 185 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0712 Dod-Chr10 21750047 21752634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0712 7 256 NAC Transcription Factor Family AT5G39820 47.059 1.08e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g0712 NAM 1.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0712 - - gmx:100790471 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0712 10 21750047 21752634 Dod10g0712 10 21750047 21752634 ECH