Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0710 ATGAAGGAGGGTGGTAGAAAACAAGGTGCAATGTCACCATGCGCGGCATGCAAGCTTCTTAGAAGGAGATGCGCCAAAGATTGTGTGTTTGCTCCTTATTTCCCTGCCGATGAACCCCAGAAGTTTGGCAGTGTCCACAAGGTTTTCGGGGCTAGCAATGTCAACAAGATGTTACAGGAATTACCTGAGCACCAACGAAGTGATGCAGTTAGCTCAATGGTGTATGAAGCCAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTAGGTGCCATATCCTCTCTGCAGCAGCAAGTTGATGAGCTCCAAACTCAATTGGCACTAGCACGAGCAGAGGTTGTGCACATGAGAATGCGCCAATTCTCACCACCCTCATCATCAAATCAGCAACAACACCAACCATCATCAATGCCTCCTTCTTCACCAGAGCACTTGTGCCAATCAAGCAGGGCCCTTTCTTCACAGACCAAGTCCTTTTTTACCATGGACATGGTCCTTGATCAAGCCAACATGGGGCAGTCATTGTGGTCGTGCTAG 537 0.4898 MKEGGRKQGAMSPCAACKLLRRRCAKDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDELQTQLALARAEVVHMRMRQFSPPSSSNQQQHQPSSMPPSSPEHLCQSSRALSSQTKSFFTMDMVLDQANMGQSLWSC* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0710 178 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Dod10g0710 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 175 - -
Dod10g0710 178 MobiDBLite consensus disorder prediction 120 148 - -
Dod10g0710 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 175 - -
Dod10g0710 178 Coils Coil 92 119 - -
Dod10g0710 178 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0710 Dod-Chr10 21682121 21684992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0710 1 178 AS2 family AT1G31320 67.978 4.35e-72 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod10g0710 LOB 2.2e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0710 - - gmx:100803188 280.411