Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0702 ATGGGGAAAGGAAGAGCACCATGCTGTGATAAGTCTCAAGTGAAGAAAGGACCTTGGAGCCCTGCTGAAGACCTAAAGCTCATAGCTTTCATCCAGAAACATGGCCATGAAAACTGGCGTGCTCTTCCCAAACAAGCAGGGCTTCTGCGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTATCTCAGGCCTGATGTAAAGAGAGGCAATTTTACAGCAGATGAAGAGGAAACCATAATAAAGCTGCATAAGGCCTTAGGAAACAAGTGGTCCCAGATTGCTTCCCGTTTGCCTGGTAGGACTGACAATGAGATCAAGAATGTGTGGAACACACACTTGAAGAGAAGATTGGCTGCAAAAAGCTCAGAGTCAAGTGCTGATGAATCCAAGCTTGAATCATCAGTGACTTCACCCTCTTCATCTTCATCTGAGTCATTTTTCTCAAATGAGACTCCAAATCCAGCAAAGGCTATTGGTAATGAAGTAACTGAGCAGGCTTCACAAGTGACAGTGTCAGAGAAAATTGAGCAAGATTCAGGAAAACAAGAGCCCAATATTGAACCTGATGTTGGCATCACTAAGGACCCAAAAGGGTCATCAATTTCACTATCTTCTGTTGAGTCAAATATCTTAAACTCAGGTCAGGTTGTTGAGTACAACCCAGAACAAGAATTGCACTCTCCATTATTAGCCTATCTAGGACCCTATGATGTTGATACAACAGTAGAAGAGGTGGATAAACCAAACCATCCTATTGAAATTCCATGGGACTCAGATTATGATTTTTGGAAGGTGCTAGATAACCTTGATCTCGAGTCCTTTGTCACAGCGTCCCCGGTTCCTGCCAGCCAAGCAGCAAAATTGGGAGATGGGAATGTTCAAGATGCTGAAGCAAGGATGTGGTCCCATGAGTTTGAGAGTGAGTTCGGAGTAGGTGAAACGAAGGAGTCAAACAAGGATCAGTTCCCACCAAATGATTACCAAGCTGAGCCAGGAATGGACCCAAATGCATTTGATATAGATCTTGTGACAAGGCCAGAATCTGAACTAGACTTGGGTTATATTCAATTATGGCCCTCTTGGCCTCATAATACTAGTCTTTAA 1107 0.4336 MGKGRAPCCDKSQVKKGPWSPAEDLKLIAFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTADEEETIIKLHKALGNKWSQIASRLPGRTDNEIKNVWNTHLKRRLAAKSSESSADESKLESSVTSPSSSSSESFFSNETPNPAKAIGNEVTEQASQVTVSEKIEQDSGKQEPNIEPDVGITKDPKGSSISLSSVESNILNSGQVVEYNPEQELHSPLLAYLGPYDVDTTVEEVDKPNHPIEIPWDSDYDFWKVLDNLDLESFVTASPVPASQAAKLGDGNVQDAEARMWSHEFESEFGVGETKESNKDQFPPNDYQAEPGMDPNAFDIDLVTRPESELDLGYIQLWPSWPHNTSL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0702 368 MobiDBLite consensus disorder prediction 120 200 - -
Dod10g0702 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Dod10g0702 368 PANTHER - 1 322 - -
Dod10g0702 368 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Dod10g0702 368 MobiDBLite consensus disorder prediction 129 176 - -
Dod10g0702 368 CDD SANT 71 114 IPR001005 -
Dod10g0702 368 Gene3D - 15 68 - -
Dod10g0702 368 MobiDBLite consensus disorder prediction 311 337 - -
Dod10g0702 368 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Dod10g0702 368 CDD SANT 18 63 IPR001005 -
Dod10g0702 368 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 322 - -
Dod10g0702 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Dod10g0702 368 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Dod10g0702 368 Gene3D - 70 138 - -
Dod10g0702 368 SMART sant 15 65 IPR001005 -
Dod10g0702 368 SMART sant 68 116 IPR001005 -
Dod10g0702 368 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Dod10g0702 368 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0702 Dod-Chr10 21267915 21270771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0702 1 323 MYB Transcription Factor Family AT1G79180 41.737 3.36e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod10g0702 Myb_DNA-binding 1.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0702 K09422 - gmx:100805511 465.307