Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0675 ATGGCGCTGAGCACGTACTTCAACTGGGACACATCACTTCAAACCCCCATCTCTGAAATCTGCACCAACAACAACAACAACTTCTTCCATGAACCAACACCAGAACTAGCCCGAGACTACTATCACCAAAACCACAACTTTTTCCCCTGCTCAGATGAAAGCTTCTTGCTTCCAAACACCTTCTTCGACCCTTGTTATTGTGACCCAAATTGTTTTCTCTACTCTGAGATTTACCCTTCTGATCAACTTCTCAATTTCAGTACTCCCTCTTGTTATGATGACCCTTTTATCTCACTCAATGACATTTTCCAAACTGAAAAGGGTTGTTGCAACAACAATAACAACAACAACACCCTCTTCCCATGTCCAAAACGCCAAAAAATGTGGTTCCATGAGGAGCAAGAGCTTGCACCATCCAATAATTTCCTTGATGGTTTTGTTGTGCCTAATCCTTGTTCCTTTCCATCAGAGGAAATGCAGGAAGAACTGTTCTCTGCAGTGCCGGATTTTACAGTTCCACAATTTCCACAAAGTACTTGTGCTGTTGGAAATGGTGGTGGTGATTTTCAGTGTGAGAAAAAGGGTAATGAGAGGACGATTTCAGCACAAAGCATAGCGGCAAGGGAGAGGAGGAGGAAGATCACTGAGAAGACTCAAGAGCTTGGGAAGTTGGTACCTGGTGGACCTAAGATGAACACAGCTGAGATGCTGCATGCAGCTTCCAAGTATGTTAAGTACCTTCAAGCACAAGTTGGGATGCTTGAACTTATGAACACCCTCAAGGAAGAAGATAAGGCAGTTCCTCCAAGTGAGGATCTTCATGCTCTTGTTGCTTCTCCTTTTGTTCAAGAGAAGCTGTACTCGGAGGAAATTTGCTTTGTTCCAAAAGAGTTTGTCGCCACTTTGACAAATCATGGCGATGTTCGTTCAAGGCCTACCATCCTTAAAGATCTCAAACAGCTTATTGGGACACACATTGAGAAGAAACCAAAGCAAGATTAA 1002 0.4331 MALSTYFNWDTSLQTPISEICTNNNNNFFHEPTPELARDYYHQNHNFFPCSDESFLLPNTFFDPCYCDPNCFLYSEIYPSDQLLNFSTPSCYDDPFISLNDIFQTEKGCCNNNNNNNTLFPCPKRQKMWFHEEQELAPSNNFLDGFVVPNPCSFPSEEMQEELFSAVPDFTVPQFPQSTCAVGNGGGDFQCEKKGNERTISAQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLHAASKYVKYLQAQVGMLELMNTLKEEDKAVPPSEDLHALVASPFVQEKLYSEEICFVPKEFVATLTNHGDVRSRPTILKDLKQLIGTHIEKKPKQD* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0675 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 318 - -
Dod10g0675 333 SMART finulus 204 253 IPR011598 GO:0046983
Dod10g0675 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 247 IPR011598 GO:0046983
Dod10g0675 333 Pfam Helix-loop-helix DNA-binding domain 204 248 IPR011598 GO:0046983
Dod10g0675 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 258 IPR036638 GO:0046983
Dod10g0675 333 Gene3D - 196 267 IPR036638 GO:0046983
Dod10g0675 333 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 1 318 - -
Dod10g0675 333 CDD bHLH_AtbHLH_like 203 255 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0675 Dod-Chr10 20613921 20616166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0675 73 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 35.606 1.08e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod10g0675 HLH 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0675 - - gmx:102665938 306.219