Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0655 ATGGACGATGTAAAAAGTTGTTGGCTATCCTTCTACATGAGTGAGAGTGTCAACCATGAATTTGCCATTAGAAGGTTTTGCCCTGAAAGAATGGAGCAATTGCAAAGAGGAGAGTGGCAAGATCAAGATGCATCACTTGATCATGAAACTGAGTTTTGTTCATCTGATGCTGCCAGCACCCCTTGTTTGGCTTCCTCAGAGGTTGATGACTTTGTTGAAAGCATCATCAACATGGATCAGTATGAGTATGATGAACATGAAGACCAAGACTCCCAGGAGAAGCACCAAAGTTTTGACCACCCTTTGGTGAAAGATGAGGATGAGGTTGATGCATACTCCATGGTGAATGATCATGTCTATGGATATGTTCCAATAGCCATGGAGGATGAAGAAATGGAAGTCTATGAAAGTGGGCCAATCACCAATATGGAGGATGAAGAATTGGAAATGAGTAGCACTTTTGGTAATATCCCTGAACTTGTGCCTAGTGTGGAAGAGGCCAGCCTTGGAATGGACCAAGGGTTAGATTTAATTCACATGCTTTTGGCTTGTGCTGAGGCTGTAGGCTGCAGGGACACCCAACAAGCAGACATGCTACTTAGCAGAATTTGGGCTTTGGCTAATCCTTGGGGTGATTCCTTGCAGAGAGTCTCCCATTGCTTTGCCACAGGATTGAATTGTAGGTTGTCACTTCTTCCTCATAATGCTTCAGCAAATGGTACACATACAAGTAGTATCATGGATGTGACTTTTATCACCAGGGAGGAAAAGTCGGAAGCTTTTCAGGTACTTTGCCAAACTACTCCTTACATTGCCTTAGGCTTCTTGGCTGCAAATGAAGCTATATGCCAATCATCACATGGGAAAAGCTCCATACACATAATTGATCTAGGAATGGAACATACCCTTCAGTGGCCTTCCTTATTAAGGGCACTTGTTTCAAGGCCTGAGGGGCCTCCAAAACTCCGGATCACGGGGCTAATCGGCAATGAAGACAACACAAGACTTCGAGGTAGCATGAATGTTCTTGTGGAGGAAGCAAGATCACTGGGGATAACACTTGAATTCCACCTAATATCTGAGCCTGCAACTCCATCTCTTCTTACTAAGGAGAAGCTGCAATTGAGAGAAGGGGAAACATTATTTTTTAATAGCATCCTGCAGTTGCACAAGTATGTCAAAGAAAGTAGAGGCTATCTGAAGGAAATTCTGCAATCAATAAAGAAGTTATGTCCAGCTGCTTTTACAGTGGTAGAGCAAGACACAAACCATAATGGACCCTTCTTCCTTGGGAGATTTTTGGAATCACTACACTATTACTCTGCCATCTTTGATTCTCTTGAAGAAAGTATGCCAAGAAATAGCCAACAAAGGATGAAGATAGAGAGTGTACACTTTGCTGAGGAAATTCGCAACATTGTAGCCTATGAGGGACCAGATAGGAGGGAAAGACATGAAAGGGTAGACAAATGGCGAAGGCAACTAGGCCGCGCCGGATTTCAGGTAATGCCATTGAAGTGCACAAGTCAAGCTAGAATGCTGCTTTCTGTTTATGATTGTGATGGATATACATTGTCAAGTGGGAAGGGTTGCCTTCTACTTGGGTGGAAAGGAAGGCCTATTATGATGGCTTCTGCATGGCAAGTGGCAAGTTTGTGA 1659 0.4346 MDDVKSCWLSFYMSESVNHEFAIRRFCPERMEQLQRGEWQDQDASLDHETEFCSSDAASTPCLASSEVDDFVESIINMDQYEYDEHEDQDSQEKHQSFDHPLVKDEDEVDAYSMVNDHVYGYVPIAMEDEEMEVYESGPITNMEDEELEMSSTFGNIPELVPSVEEASLGMDQGLDLIHMLLACAEAVGCRDTQQADMLLSRIWALANPWGDSLQRVSHCFATGLNCRLSLLPHNASANGTHTSSIMDVTFITREEKSEAFQVLCQTTPYIALGFLAANEAICQSSHGKSSIHIIDLGMEHTLQWPSLLRALVSRPEGPPKLRITGLIGNEDNTRLRGSMNVLVEEARSLGITLEFHLISEPATPSLLTKEKLQLREGETLFFNSILQLHKYVKESRGYLKEILQSIKKLCPAAFTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEESMPRNSQQRMKIESVHFAEEIRNIVAYEGPDRRERHERVDKWRRQLGRAGFQVMPLKCTSQARMLLSVYDCDGYTLSSGKGCLLLGWKGRPIMMASAWQVASL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0655 552 Pfam GRAS domain family 177 548 IPR005202 -
Dod10g0655 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 550 IPR005202 -
Dod10g0655 552 ProSiteProfiles GRAS family profile. 168 548 IPR005202 -
Dod10g0655 552 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 7 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0655 Dod-Chr10 20339441 20341509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0655 172 550 GRAS Transcription Factor Family AT3G03450 37.565 4.36e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod10g0655 GRAS 7.4e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0655 - - gmx:100814931 796.964