Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0652 ATGGATAAATCAGAGCAGGCTCAACAACAGCAGCAGCAACAACAGCATGTGATGGGTGCTGGCCAAATGCCTTACTCTTCTCACTACCAGACTGCTCCCATGATAGCTTCTGGCACACCTGCTGTGCCTTCCCCGACACAGCCTGCAACTGCTTTCTCTAATTCCCCTCACCAACTTGCATACCAGCAAGCACAGCATTTCCATCATCAACAGCAGCAACAGCAACAACAGCAGCTTCAGATCTTCTGGGCAAACCAAATGCAAGAAATTGAGCAAACAATTGACTTTAAAAACCACAGTCTCCCTCTTGCTAGGATAAAAAAGATAATGAAAGCTGATGAAGATGTCCGCATGATCTCAGCAGAAGCTCCTGTTATATTTGCAAAAGCATGTGAAATGTTTATCCTGGAGTTGACTTTGCGTTCTTGGATCCACACGGAAGAGAACAAGAGGAGAACTCTTCAAAAGAACGATATAGCGGCTGCTATTTCAAGAAATGATGTTTTTGATTTCTTGGTGGATATTATTCCTAGAGATGAGCTGAAAGAGGAAGGACTCGGAATAACAAAGGCTACTATTCCACTAGGGGGCTCTCCTGCTGATATGCCATATTATTATGTCCCTCCACAGCATCCCGTAGGACCAACAGGGATGATCATGGGAAAGCCAGTCGATCAAGCAACACTATATTCTCCACAGCAGCCTCGACCTCCCATGGCTTTCATGCCATGGCCACACACACAACCCCAGCAACAGCAGCCACCCCAACAGGAACAAACAGACTCCTGA 789 0.4626 MDKSEQAQQQQQQQQHVMGAGQMPYSSHYQTAPMIASGTPAVPSPTQPATAFSNSPHQLAYQQAQHFHHQQQQQQQQQLQIFWANQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGITKATIPLGGSPADMPYYYVPPQHPVGPTGMIMGKPVDQATLYSPQQPRPPMAFMPWPHTQPQQQQPPQQEQTDS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0652 262 MobiDBLite consensus disorder prediction 225 262 - -
Dod10g0652 262 MobiDBLite consensus disorder prediction 1 20 - -
Dod10g0652 262 MobiDBLite consensus disorder prediction 236 250 - -
Dod10g0652 262 SUPERFAMILY Histone-fold 58 172 IPR009072 GO:0046982
Dod10g0652 262 Pfam Core histone H2A/H2B/H3/H4 54 163 IPR007125 GO:0003677
Dod10g0652 262 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 5 256 - -
Dod10g0652 262 Gene3D Histone, subunit A 61 178 IPR009072 GO:0046982
Dod10g0652 262 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 5 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0652 Dod-Chr10 20304337 20307619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0652 79 207 CCAAT-HAP5 Transcription Factor Family AT1G56170 88.462 1.51e-80 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dod10g0652 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0652 K08066 - gmx:100796987 387.882