Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0625 ATGAGATTTGGGTCGATACGGTGTCTCACACTTTTGCAGCTCGATTATTATCCTCCTCGGCGAGAGAGTGGACCAGTGCAGTTGGAACGTAGGAAGTGGAAATCGATCGAAGGAAGGAATGGCCTCATCGGTCGCAGCGGTGAACCTCCGCAGCATGGCACTACCGTCCTCCAAGCTTCTCTCTCTTTCCCGTTCCTATCATCTCCTCTCCATTCACCTCCGGATGCAGACGCACCACTCCACCCCTCCCCTCACTCGCAAGGCAAAAAATCCACTCTTCCACACACACACACTTTTCTTTGGTGTCTGAGTGAGAGGTTTTTTGAATGGCAGATAAACACGGATGCAAAGAGCATTGCTTCCCAGCTCAGTAGCTCTGGGCTGTTGAGAACTCAGGGCCTGATTGGAGGGAAATGGAGTGATGCCTATGATGGGAAAACCATACCGGTTTATAATCCAGCAACGGGTGAATCTATAGCAGATGTTGCATGCATGGGTGGAAGGGAGACGAATGATGCGATTTCTTCAGCCTATGATGCATTTAGATCATGGAGCAAAATCACTGCTGCTGAGAGAAGCAAATTTCTGAGAAAATGGTATGATTTGCTAATGGCACATAAAGAAGAGCTAGCTCAACTTATAACCTTGGAGCAAGGGAAGCCTCTAACGGAGTCTTTGGGTGAGATAAAATATGGGGCTGGCTTTATTGAGTTTGCATCTGAGGAGGCAAAACGCGTATATGGGGATATAATTCCTGCACCTCTATCTGATCGGCGAATATTTGTTTTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATCACACCGTGGAACTTTCCCCTGGCTATGATTACACGAAAGGTTGGTCCAGCCCTTGCATGTGGATGTACAGTGGTCATAAAGCCCTCTGAACTTACGCCCCTCACTGCTTTAGCTGCAGCAGAACTCTCTATTCAAGCTGGAATACCTGCGGGTGTTGTGAATGTGGTTATGGGAAATGCTCCTGGAATTGGTGATGCTTTACTTGCAAGTCCACAGGTACGCAAGATCACATTCACAGGCTCAACAGCTGTTGGAAAGAAATTGATGGCCGGTTCTGCTGAGACTGTTAAAAAAGTATCTCTGGAACTTGGGGGCAATGCACCTTGCATAGTTTTTGATGATGCTGACCTGGATGTTGCAGTTAAAGGAACTCTTGCAGCTAAGTTCCGTAATAGTGGACAAACATGTGTTTGTGCGAATAGAATTCTTGTGCAAGAAGGTATATATGAGAAATTTGCAAATGCTTTGCTTGATGCTGTTCAGAAGATGAAAGTTGGGGATGGTTTTAGTGAAGGTGTGGCTCAGGGCCCTCTGATCAATGAAGCTGCTGTGAAAAAGGTTGAGTCCTTACTTCATGATGCTACATCCAAGGGGGCAAAGGTAGTTCTTGGGGGTAAAAGACATGGCCTTGGATTTACCTTTTATGAACCTACAATCGTCACTGATGTCAACAATGAGATGCACATATCAAGGTAA 1515 0.4627 MRFGSIRCLTLLQLDYYPPRRESGPVQLERRKWKSIEGRNGLIGRSGEPPQHGTTVLQASLSFPFLSSPLHSPPDADAPLHPSPHSQGKKSTLPHTHTFLWCLSERFFEWQINTDAKSIASQLSSSGLLRTQGLIGGKWSDAYDGKTIPVYNPATGESIADVACMGGRETNDAISSAYDAFRSWSKITAAERSKFLRKWYDLLMAHKEELAQLITLEQGKPLTESLGEIKYGAGFIEFASEEAKRVYGDIIPAPLSDRRIFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPGIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRILVQEGIYEKFANALLDAVQKMKVGDGFSEGVAQGPLINEAAVKKVESLLHDATSKGAKVVLGGKRHGLGFTFYEPTIVTDVNNEMHISR* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0625 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 380 503 IPR016163 GO:0016620
Dod10g0625 504 SUPERFAMILY ALDH-like 120 502 IPR016161 GO:0016491
Dod10g0625 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 402 413 IPR016160 GO:0016491
Dod10g0625 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 146 379 IPR016162 GO:0016491
Dod10g0625 504 CDD ALDH_F5_SSADH_GabD 150 504 - -
Dod10g0625 504 MobiDBLite consensus disorder prediction 72 91 - -
Dod10g0625 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 374 381 IPR029510 GO:0016491
Dod10g0625 504 Pfam Aldehyde dehydrogenase family 141 503 IPR015590 GO:0016491
Dod10g0625 504 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 126 504 - -
Dod10g0625 504 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 126 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0625 Dod-Chr10 19723424 19734672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0625 93 504 Aldehyde Dehydrogenase Gene Family AT1G79440 75.243 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0625 K17761 - gmx:100808318 708.753