Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0622 ATGACAGACCCATGTGTGTTCAAGGTGACTCGGGTCTTGTCCTCACCTACTGACCCAAAGCCTCGCCTCCGTTGGACTGTTGAGCTCCATGAGCGCTTTGTTGATGCTGTCACTCAGCTTGGAGGGCCTGATAAGGCCACTCCTAAAACCATCATGAGGGTTATGGGAGTGAAGGGTCTCACCCTCTACCACCTCAAGAGCCACCTCCAGAAATTTAGGCTTGGCAAGCAGCCCCACAAGGAATTCAATGATCACTCAATTAAGGATGGTATGAGAGCTTCGGCTTTAGAACTGCAACGAAATACTGCCTCCTCTTCTGCCATGATTGGCCGCAACATGAATGAGATGCAAATAGAGGTGCAGAGAAGACTGCATGAACAACTCGAGGTTCAAAAACACCTTCAGCTAAGGATTGAGGCTCAAGGGAAATACATGCAAAGCATATTGGAGAAGGCCTATCAAACACTTGCAGGTGAAAACATGGCATCTGCTGCCAATAACATGAAGGGTATTGGGCCACAAGGCATCCCTGACATGGGAGTCATGAAAGAATATGGTTCCCCTCTCAATTTTTCTTCATTTCAAGACCTTGATATTTATGGAGGTGACCAAATTGACCTTCAGCAGAACATGGAAAAGCCACCCCTTGATGCGTTCATGCCAATCAGTGAGAACCTGTGCCTTGGGAAGAGGAGGCCTAACCCTTATAGTGGGAGTGGGAAGAGCCCTTTGATTTGGAGTGAAGATCTCAGGCTTCAAGATTTGGGGACAGCCTCATCATGCCTTGGCCCTCAAGATGACCCTTTCAAAGGTAGTGACCAGATTCAGATTGCACCAGCATCAATGGATAGAAGTACTGACATTGACCCCATATCTGATCTCTATGACACAAAGCCTGTGCTCCAAGGGGAGGACAAGAAATTTGATGCATCTATGAAGCTTGAAAGGCCGTCACCAAGAAGGGCACCTCTTCAGGCTGAAAGGATGAGTCCTATGATCAGCACTGGCTCCATGGCACAAGGTAGAAGCTCACCTTTTGGGTGA 1044 0.4799 MTDPCVFKVTRVLSSPTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAANNMKGIGPQGIPDMGVMKEYGSPLNFSSFQDLDIYGGDQIDLQQNMEKPPLDAFMPISENLCLGKRRPNPYSGSGKSPLIWSEDLRLQDLGTASSCLGPQDDPFKGSDQIQIAPASMDRSTDIDPISDLYDTKPVLQGEDKKFDASMKLERPSPRRAPLQAERMSPMISTGSMAQGRSSPFG* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0622 347 Pfam MYB-CC type transfactor, LHEQLE motif 116 155 IPR025756 -
Dod10g0622 347 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 17 300 - -
Dod10g0622 347 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Dod10g0622 347 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Dod10g0622 347 Gene3D - 19 77 - -
Dod10g0622 347 MobiDBLite consensus disorder prediction 299 347 - -
Dod10g0622 347 MobiDBLite consensus disorder prediction 330 347 - -
Dod10g0622 347 Pfam Myb-like DNA-binding domain 23 71 IPR001005 -
Dod10g0622 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Dod10g0622 347 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 17 300 IPR044848 GO:0003700
Dod10g0622 347 MobiDBLite consensus disorder prediction 299 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0622 Dod-Chr10 19671527 19673601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0622 17 347 G2-like Transcription Factor Family AT1G79430 57.637 2.29e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod10g0622 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0622 - - gmx:100807793 575.089