Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0621 ATGGGATCTGGGAAAATATTGCAATCACAGTTCTCCAATTGGTGTGGAATCTTTTTGTTTAAGTGGTTCCTTTTGGCCATACTATATTCAAGTGAAACCTTTTCTAATGTTGTTGGAAGCCCACACTATGTTGCACCAGAAATCCTGTGCAAACACTACGGACCTGAATCAGATGTGTGGATTGCTAGAGTTATCTTGTACATCTTATTAAGTGGGGTGCCTCCATTCTGGGCCGAAACCGAGCAAGGGATCTTCCGACAGATTTTACTTGGAAGACTTGATTCCCAGTCTGAGCCATGGCCTAGCATTTCTGACAGCGCCAAGGATCTGATTCGGAAAATGCTTGGTCGAAATCCAAAAACAAGGCTTACAGCTCATGAAGTACTTTGTAAGTCTACTAAATTTTATAGAGCAAGCATCATCATTTTCATGAATACACTTAAAACAACTCTTGGATTGGAGTCGAAGGTCCGTGGCACTGAACTGGTTTTCTGTGTCAGGTCACCCTTGGAGCAGGTCATATAA 525 0.4229 MGSGKILQSQFSNWCGIFLFKWFLLAILYSSETFSNVVGSPHYVAPEILCKHYGPESDVWIARVILYILLSGVPPFWAETEQGIFRQILLGRLDSQSEPWPSISDSAKDLIRKMLGRNPKTRLTAHEVLCKSTKFYRASIIIFMNTLKTTLGLESKVRGTELVFCVRSPLEQVI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0621 174 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 31 131 - -
Dod10g0621 174 Pfam Protein kinase domain 27 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0621 174 Gene3D Transferase(Phosphotransferase) domain 1 15 150 - -
Dod10g0621 174 SUPERFAMILY Protein kinase-like (PK-like) 29 130 IPR011009 -
Dod10g0621 174 SMART serkin_6 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0621 174 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 131 - -
Dod10g0621 174 ProSiteProfiles Protein kinase domain profile. 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0621 Dod-Chr10 19658841 19659666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0621 23 130 EF-hand Containing Proteins AT3G10660 71.560 8.05e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod10g0621 Pkinase 5.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0621 K13412 - gmx:100805961 184.882