Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0620 ATGCAGGCCGAGCGCAGATTGGTGGCTGATATGCAGGCTGAGGGGCAAATCGGTGGCGACTGTGTAGATGGTGGTTATGGAGTTATTTATCAAGGACAGTTGATCAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAACAACATTGCTCAGGCTGAGAAAGAATTTAGAGTGGAGGTTGAAGCCATTGGCCATATCCGCCACAAAAATTTGGTTCACCTTTTAGGGTACTACATTGAAGGGACTCACAGGATGTTAGTCTATGAGTATGTAAATAATGAAAATTTGGAGCAATGGCTTCATGGAGCTATGCGTCACCATGGATATCTTACATGGGAAGCACGTATCAAGATTCTCCTTGGCACGGCCAAAGCGCTTGCATACTTGCATGAAGCAATTGAGCCGAATGTGGTACACCGAGAAATCAAGTCAAACAACATATTAATTGATGACGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCTAAGTTATTGGGTGCTGGAAAAAGTCATGTCACCACACAAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAAAAGAGTGATGTGTATAGCTTTGGTGTTTTGCTACTAGAAGGAATTACTGGAAGAGATCCAGTAGACTGTGATCGTCCAACATAA 672 0.4301 MQAERRLVADMQAEGQIGGDCVDGGYGVIYQGQLINGTPVAVKKILNNIAQAEKEFRVEVEAIGHIRHKNLVHLLGYYIEGTHRMLVYEYVNNENLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPNVVHREIKSNNILIDDDFNAKVSDFGLAKLLGAGKSHVTTQVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDCDRPT* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0620 223 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 23 222 - -
Dod10g0620 223 SUPERFAMILY Protein kinase-like (PK-like) 23 220 IPR011009 -
Dod10g0620 223 Gene3D Transferase(Phosphotransferase) domain 1 92 223 - -
Dod10g0620 223 Pfam Protein kinase domain 23 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0620 223 ProSiteProfiles Protein kinase domain profile. 15 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0620 223 PIRSF ILK 22 223 - -
Dod10g0620 223 PANTHER OS01G0323000 PROTEIN 23 222 - -
Dod10g0620 223 Gene3D Phosphorylase Kinase; domain 1 22 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0620 Dod-Chr10 19629267 19630828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0620 23 222 Trihelix Transcription Factor Family AT1G70460 53.500 2.16e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dod10g0620 Pkinase 5.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0620 - - lja:Lj1g3v4804250.1 382.874