Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0584 ATGGCCACCGCCGCCCCCGCCACAACCTCCGCGCCGCCGCGACAGCTGTCGCAGAAGGAGCAGGACATACAAATGATGCTAGCCGCCGAGGTCCACCTCGGAACCAAAAACTGCGACTTCCAGATGGAGCGCTACGTATTCAAGCGCCGCAATGACGGTATTTATATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCCAGGATTATCGTTGCCATTGAGAATCCGCAGGATATCATTGTTCAGTCCGCCAGGCCTTATGGTCAGAGAGCTGTACTCAAGTTTGCTCAATACACTGGCGCTAACGCAATTGCAGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAAACATCCTATAATGAGCCTCGTCTTCTCATTCTTACTGATCCGAGAACAGATCATCAGCCCATCAAGGAAGGTGCTCTTGGAAATATACCAGTTATTGCCTTTTGTGACACTGATTCTCCAATGCGGTATGTTGACGTTGGTATTCCTGCTAATAATAAGGGGAAGCACAGTATCGGTTGCCTCTTTTGGCTTTTAGCAAGGATGGTTCTGCAGATGCGGGGCACTATTCGTCCAGGGCATAAGTGGGACATAATGGTGGATTTATTCTTCTATAGAGAACCTGAGGAGGCCAAGCAACAAGAGGAGGAGGAAGCCCCAGCTGCCCCAGAATATGCCATTGCAGACTTCAATGCTGCTGGTATTCCCAGTTTCCCTGCTGATGGTGAATGGCCTGCTGCAGTTGAACAACCCTGGCCTGAGGCAGTTCCACAACCTATCCCAGCAGCTCCTGCTAACTGGGCCCCAGAAGCTGGTGAGTGGGGTGAGTCTGTTTCAGCTCCACAAGTTTCTGTGCCTGCACCTGCACCTGCACCTGCAACTGGAAGTGTCGCCCCAACGGGCTGGGAATAG 933 0.5155 MATAAPATTSAPPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPVIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDIMVDLFFYREPEEAKQQEEEEAPAAPEYAIADFNAAGIPSFPADGEWPAAVEQPWPEAVPQPIPAAPANWAPEAGEWGESVSAPQVSVPAPAPAPATGSVAPTGWE* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0584 310 PANTHER 40S RIBOSOMAL PROTEIN SA 15 294 - -
Dod10g0584 310 SUPERFAMILY Ribosomal protein S2 18 208 IPR023591 -
Dod10g0584 310 CDD RPS2 26 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 Gene3D - 22 228 - -
Dod10g0584 310 TIGRFAM uS2_euk_arch: ribosomal protein uS2 19 214 IPR005707 GO:0003735|GO:0006412|GO:0015935
Dod10g0584 310 Hamap 40S ribosomal protein SA [rps-0]. 10 254 IPR027498 GO:0003735|GO:0006412|GO:0015935
Dod10g0584 310 Pfam Ribosomal protein S2 26 121 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 PRINTS Ribosomal protein S2 signature 144 155 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 PRINTS Ribosomal protein S2 signature 165 179 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 PRINTS Ribosomal protein S2 signature 23 41 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 PRINTS Ribosomal protein S2 signature 53 62 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 PRINTS Ribosomal protein S2 signature 127 144 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 PRINTS Ribosomal protein S2 signature 102 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 PANTHER 40S RIBOSOMAL PROTEIN SA 15 294 IPR005707 GO:0003735|GO:0006412|GO:0015935
Dod10g0584 310 ProSitePatterns Ribosomal protein S2 signature 1. 23 34 IPR018130 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 ProSitePatterns Ribosomal protein S2 signature 2. 127 151 IPR018130 GO:0003735|GO:0005840|GO:0006412
Dod10g0584 310 MobiDBLite consensus disorder prediction 281 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0584 Dod-Chr10 18863416 18866410 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0584 14 288 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 73.285 1.36e-150 422