Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0575 ATGATCTTGCAAACCCAACAACAAGCACACCCAATTTTCATGTTCTCATCCACCTATAAGTCCAACCTCCCATTACGTAACCTTAACCATGTCCAACTTCACCTTGGTGTCTCCACCACACTTTCACGGGTGCCCTTCATGTCCATTTGCACAGGAAAATCTTGCAGGAGCATGAGGAGGAGGAACAGGAGCAAGTGTTTCTCTTCATCTGCAACTACACCAGCTCCATTGCCACCTGACCCAGATAAGGAGGTGAAGAAGGTGGGGGAAGAGGGTGATGGTGGTTTAGTTGCACAGGGTGGGAGCCCTGATCTTCAAGCCCTTTTCAGAAGGTTCTGGAAAGTGGCAGCTCCATATTGGTATTCAGATGACAAGGTCCAAGCTAGATTGCAGCTTGCTGGTGTTTTTGCTCTCACTTTGGCTACAACTGGAATCAGTGTTGGATTCAATTTCCTGGGAAGGGACTTCTACAATGCACTTGCCAACAAGGATCAAGAGCAATTCACCAAGCAACTGCTTTACTACTTGTGTGGCTTTGCTGGAGGAATCCCGTTTTTTGTCTTGAGAGATTATGCCAGAGAAACTCTTTCTTTGAGATGGAGGTCTTGGATGACGAGCTATTACATGGATCGCTATCTTAAGAATCAGACTTTCTATAAAATTCAGTCACAGTCAATCATTGATAATCCAGACCAGCGAATTGTTGATGATCTAAGTTCTTTCACCGGGTCAGCTCTGTCTTTCTCATTGATATTCTTCAATGCTGCTGTGGACTTAATCTCGTTCAGTAATATCTTATATGGAATCTATCCTCCCCTCTTTGTTGTTCTTCTCGTATACTCCATTGGTGGGACAGCTATCAGTGTTTTCCTTGGAAGGGAATTGGTGACTTTAAACTTCTTGCAAGAGAAAAAAGAAGCAGACTTTCGTTACGGACTTGTAAGGGTTCGGGAAAATGCTGAGTCGATTGCTTTCTACGGTGGTGAAGAAAGTGAAATGCAACTTCTTCTCCAGCGATTCAAAAGTGCTTTTGAAAATTTGAGCCGATTGTTGATTTCTTCAAGAAATTTGGAGTTCTTCACCAACGGCTACCGTTATCTCATTCAAATTCTTCCAGCTGCTGTTGTTGCTCCCATGTATTTCTCTGGAAAAATTGAGTTTGGTGTAATCAATCAATCAGTCTCTGCTTTTAATCATATCCTTGGTGACTTTTCCCTCATTGTGTACCAGTTTCAAGCTATAAGTGCTTTTTCTGCTGTTATTAATCGGCTAGGTGAGTTTGATGATATTTTGGACAGAAGCAGCTCAAAATCTCTCTCTGATACTTTAGAAGATGTGCATATTACGTACAAAGATTTTAGGAGTTCGCCTGTATTGGAATCTAATGGATCCACGCCACCAGAAAAATATGGAACATTACTAGAGATAAAAAATTTGACTCTGAATACTCCAAGTGAATCTGTACTTATTAGAGACTTGTCAGTGACGATCAAGGAAAAGGATAATTTACTGGTGATGGGACCAAGTGGCAGTGGTAAGACTTCTTTGTTAAGAGCTCTGGCGGGTCTTTGGAGAACTGGAACTGGAACGATCATATACTATTTGAATGGTGGAGAAGGTCTCGAGCAAACCATTGGCTCAGATGTGAGTACTCCTTCAGTAAATGCTGCTCATGACACAGATGAAGAACACGGAAAATCCATGAGCAGACAATCTAGAATATTTTTTCTTCCTCAAAGGCCATATATGGTTTTGGGTACTCTTCGTCAGCAATTACTTTATCCAATATGGACTGATGATGCTGTTGCTATGTCAGATGATACTAAACCAGGAAATATGCTTCCTTTCTTGTCTAAGTTCCCAATTTCAGATGACACGAAAGATAAGCCTATGAAGCCAACGACAGATGAGCTGATACAGGTCTTAAAGGATGTCCGCCTTTGCTATTTATTGGCTCGTTTCAGTTTGGATTCAACGCAAGAATGGTCCAGTGTTCTTTCTGTGGGAGAGCAGCAACGCCTTGCATACGCCCGTCTTTTGCTTTCAAGGCCTCAGTTGGTTTTATTGGATGAATCAACAAGTGCACTTGATGAAGCCAATGAGGCTTATTTGTACCAGAAGATTGAAGCAGCAGGCATAACATACATCAGCATTGGCCATCGGTCTACCTTGTGTGATTACCACAACAGAATTTTAACCATATCCACAGCGGATTCTGACAATGAACAGATAAATTGGAGCATCGAACCCACCAAACGTGAATCCTCTCCAAAGTTTACAAATCTATGA 2289 0.4194 MILQTQQQAHPIFMFSSTYKSNLPLRNLNHVQLHLGVSTTLSRVPFMSICTGKSCRSMRRRNRSKCFSSSATTPAPLPPDPDKEVKKVGEEGDGGLVAQGGSPDLQALFRRFWKVAAPYWYSDDKVQARLQLAGVFALTLATTGISVGFNFLGRDFYNALANKDQEQFTKQLLYYLCGFAGGIPFFVLRDYARETLSLRWRSWMTSYYMDRYLKNQTFYKIQSQSIIDNPDQRIVDDLSSFTGSALSFSLIFFNAAVDLISFSNILYGIYPPLFVVLLVYSIGGTAISVFLGRELVTLNFLQEKKEADFRYGLVRVRENAESIAFYGGEESEMQLLLQRFKSAFENLSRLLISSRNLEFFTNGYRYLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVINRLGEFDDILDRSSSKSLSDTLEDVHITYKDFRSSPVLESNGSTPPEKYGTLLEIKNLTLNTPSESVLIRDLSVTIKEKDNLLVMGPSGSGKTSLLRALAGLWRTGTGTIIYYLNGGEGLEQTIGSDVSTPSVNAAHDTDEEHGKSMSRQSRIFFLPQRPYMVLGTLRQQLLYPIWTDDAVAMSDDTKPGNMLPFLSKFPISDDTKDKPMKPTTDELIQVLKDVRLCYLLARFSLDSTQEWSSVLSVGEQQRLAYARLLLSRPQLVLLDESTSALDEANEAYLYQKIEAAGITYISIGHRSTLCDYHNRILTISTADSDNEQINWSIEPTKRESSPKFTNL* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0575 762 Pfam ABC transporter transmembrane region 2 124 381 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod10g0575 762 SMART AAA_5 499 745 IPR003593 -
Dod10g0575 762 Pfam ABC transporter 491 694 IPR003439 GO:0005524
Dod10g0575 762 Gene3D - 470 747 IPR027417 -
Dod10g0575 762 SUPERFAMILY ABC transporter transmembrane region 110 427 IPR036640 GO:0005524|GO:0016021
Dod10g0575 762 CDD ABCD_peroxisomal_ALDP 474 735 - -
Dod10g0575 762 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 474 761 IPR003439 GO:0005524
Dod10g0575 762 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 90 751 - -
Dod10g0575 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 734 IPR027417 -
Dod10g0575 762 MobiDBLite consensus disorder prediction 65 95 - -
Dod10g0575 762 Gene3D ABC transporter type 1, transmembrane domain 102 430 IPR036640 GO:0005524|GO:0016021
Dod10g0575 762 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 133 416 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod10g0575 762 PANTHER ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3 90 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0575 Dod-Chr10 18695121 18703585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0575 59 756 Acyl Lipid Metabolism Gene Families AT1G54350 64.023 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0575 - - gmx:102661014 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0575 10 18695121 18703585 Dod10g0575 10 18695121 18703585 ECH