Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0570 ATGATGGCAGGCAGTGGACAACTAACGGTTCCTCCGGGCTTCCGGTTCCACCCTACTGATGAGGAGCTTCTCTACTATTACCTGAGGAAGAAAGTTTCATATGAAGCCATTGACCTTGATGTCATCAGAGAAATAGATCTCAACAAACTTGAGCCTTGGGACCTCAAAGATAAATGTAGGATAGGGTCAGGGCCTCAGAATGAGTGGTATTTCTTCAGCCACAAAGACAAGAAATACCCAACAGGAACCAGAACAAATAGGGCAACTACAGCTGGTTTTTGGAAAGCAACTGGAAGGGACAAGGCCATATACCACAGCAATTCCAAGAGGATTGGCATGAGGAAAACCCTAGTGTTCTACACTGGCCGTGCCCCACATGGCCAGAAGACTGATTGGATCATGCATGAGTACCGCCTTGATGAAGATGATGTAGAAGTTCAGGAAGATGGATGGGTTGTCTGCAGGGTTTTCAAAAAGAAAAACCAAAATAGGGGTTACCAACAAGAAATTGAAGAAGAAGAGCATCATCACCTAACCCACATGAGAGCAAGTGGTCCTTGCCAGGTTCTGGAGCCAAAACATCATCACATGCAAGGACTATATGATTACACCACCTTTGATGGCTCAATGCACCTACCACAGTTGTTCAGTCCAGAATCAGCTGCTGTGGCACACACCAGTTCCTTGGCCTCATCTATGAATGCCATGGACATCCTTGAGTGCTCTCAAAACCTGCTGAGGCTCACAACAACTACTACCAATCCCAGTGGCCTCAACCTCATGCAACAACAGCCAGGGGAGAGGTTCAATGGTGACTGGTCATTCTTGGACAAGCTCCTAGCATCTCACCATGGCACCATGGATCAGCATCACCATCAGCATCATCATCATCATCCACAAAGCAAATGCAGCCCTCCAACTCATCACCAGGCTGCTGCTGCAGCTGCTGTGGCCACTCCATCTCAGAAGTTTCCATTTCACTACCTTGGCTGTGAGAACCATGATATCATGAAATTTTCCAAGTAG 1026 0.4708 MMAGSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREIDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDVEVQEDGWVVCRVFKKKNQNRGYQQEIEEEEHHHLTHMRASGPCQVLEPKHHHMQGLYDYTTFDGSMHLPQLFSPESAAVAHTSSLASSMNAMDILECSQNLLRLTTTTTNPSGLNLMQQQPGERFNGDWSFLDKLLASHHGTMDQHHHQHHHHHPQSKCSPPTHHQAAAAAAVATPSQKFPFHYLGCENHDIMKFSK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0570 341 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN-RELATED 6 319 - -
Dod10g0570 341 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Dod10g0570 341 MobiDBLite consensus disorder prediction 285 310 - -
Dod10g0570 341 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Dod10g0570 341 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Dod10g0570 341 MobiDBLite consensus disorder prediction 288 303 - -
Dod10g0570 341 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Dod10g0570 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0570 Dod-Chr10 18465727 18467507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0570 2 341 NAC Transcription Factor Family AT1G79580 52.865 2.74e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g0570 NAM 5.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0570 - - adu:107458804 531.176