Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0536 ATGAGGTACTGTGGGGGGAGATGGAGGCCTTGGGGCCATTACCTAGTAGAGATAAAGGACCATCAGTCAAAGGAGCGGCGTTGGCTCGGGACGATTGACATAACAGAGGAAGCCATATGTGTTTACGATTACACTGCTAGAGCCATGCACGATGCTAAGGCACCCATCACTGCCGCCTCCATAGTGCCCTACTTTGTCTCCACTGTGCAACCACTACCGTGCCGACCTTGCGACGTCGAAAGAACCACCATATCGCGATCCTGTGACTACTTCTGCCATCCTCGATGCAATTGCAAGCTAGCCACCACCATCTTCTTTCTTCTCCTTCACCCTTGTTTCCAAACCCAGCACCTTTCCTTAACCCCTATTTCCCCAAAACCTTCCTTAACGTTGCTAAACTCTTGA 405 0.5086 MRYCGGRWRPWGHYLVEIKDHQSKERRWLGTIDITEEAICVYDYTARAMHDAKAPITAASIVPYFVSTVQPLPCRPCDVERTTISRSCDYFCHPRCNCKLATTIFFLLLHPCFQTQHLSLTPISPKPSLTLLNS* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0536 134 SMART rav1_2 2 61 IPR001471 GO:0003700|GO:0006355
Dod10g0536 134 ProSiteProfiles AP2/ERF domain profile. 2 59 IPR001471 GO:0003700|GO:0006355
Dod10g0536 134 Gene3D AP2/ERF domain 1 57 IPR036955 GO:0003700|GO:0006355
Dod10g0536 134 SUPERFAMILY DNA-binding domain 3 54 IPR016177 GO:0003677
Dod10g0536 134 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 54 - -
Dod10g0536 134 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0536 Dod-Chr10 17616430 17616834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0536 2 54 AP2-EREBP Transcription Factor Family AT1G12980 62.264 2.73e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0536 - - gmx:102661952 82.0333