Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0525 ATGGGATCAAGCAGCTATCTATGGAATTTTGCTAAAAAGTTTGTCACATTTGGGCTCATTATTGTGACAGTGTCTGATCGTTATGTGACTGTGGTTCCAGTTCGAGGTGGCTCTATGTCTCCCACATTTAATCCAAAAACTAGCACTTCTATGGGAAATTTTTCTGATGACTATGTCTTGGTTGAGAAATTCTGCCTTAGCAAATACAAGTTTTCACATGGAGACGTTGTGGTTTTCCGCTCCCCATTGAATCACAAGGAGACACACATAAAGAGAATAGTTGCATTACCTTGTGAATGGTATGGCACTCGTCATAACTATGATGTGCTGAAGGTTCCAGAAGGACATTGTTGGGTTGAGGGAGACAACGCAGCTTCTAGCATGGATTCGAAGTCATTTGGACCTATTCCTTTGGGTCTTGTTCGTGGAAGGGTGACCCATGTCGTGTGGCCTCCACAAAGGATAGGTGCTGTCTAG 477 0.434 MGSSSYLWNFAKKFVTFGLIIVTVSDRYVTVVPVRGGSMSPTFNPKTSTSMGNFSDDYVLVEKFCLSKYKFSHGDVVVFRSPLNHKETHIKRIVALPCEWYGTRHNYDVLKVPEGHCWVEGDNAASSMDSKSFGPIPLGLVRGRVTHVVWPPQRIGAV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0525 158 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 158 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Dod10g0525 158 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Dod10g0525 158 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Dod10g0525 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod10g0525 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod10g0525 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod10g0525 158 Pfam Signal peptidase, peptidase S26 107 150 IPR019533 GO:0004252|GO:0006465
Dod10g0525 158 Pfam Signal peptidase, peptidase S26 8 97 IPR019533 GO:0004252|GO:0006465
Dod10g0525 158 Gene3D Umud Fragment, subunit A 26 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0525 Dod-Chr10 17353620 17356890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0525 39 158 MADS-box Gene Family AT1G29960 34.921 1.27e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0525 K09648 - gmx:100527429 270.396