Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0522 ATGGTTAAACCATCATCTTTCCTATATCGTATGGAAAACCACCAAAACCACAACCCGACCCAAGACCCAGACCTAGAGAAGAAGCAAAACCACCAACACCACCACCCTCAGGTTTGGGGCACGTGGGAAGAGCTCTTGCTGGCGTGCGCCGTGAACCGCCATGGCTTCAAGGACTGGGACACCGTCGCCATGGAGGTCCAGTCGCGCACCACCCTCCCCAACCTCCAAGCCACCGCGCGCCACTGCGAGCAGAAATTTCACGATCTCAGCCGCCGATTCGCCGACCAATGCAACGACGCCGTCCAGCCCCACCGCCAGAATGGCGGGGCCGCCGGCGACAACTCCGATCACGTTCCCTGGCTCGACGAATTGCGAAAGCTCCGCGTCGCCGAACTCCGCCGCGAGGTCCAACGCTACGACGTTTCCATTCTGTCGTTGCAGTCGAAGGTGAAGAAGTTGGAAGAGGAGAGAGAGAAAAAGAACGACGGAAAAGTCGACGAGAAACCAGATCTGGCGGTTCCCGGCGAGCCGCGGCCGGAAAACGACGGAACCGGCAGAGAACGAGAAGTTCCTGAACCGGCCGGTTCGGAACCGGAGATTCGGCGGCTCGACGAGAGCACCACGAACACCGATAAACTGTTGCCAACTACTGGCGACGAGTCAGACCGAGAGAACCAGTCGGTTAACGAATCGAATTCGACCGGTTCGCGGTTCGATGGAGGGAAAACCGGGGACGGTGACGGGAAGGTAGGGCTCGGAACGGCTCCGGTTCATTCCGGTCCGAAAGAACCGGATCCGGTTGGGAAGAAAGGGAAGCCAGTTGGGGAGGAATCGAATAACGGTAGCTACGATACTGTGGTTAAGGTTCCGACGTGCGAGTCGCAGCCTCCGAGTGAGGAGAGGAAGTCGGAGGGTGACTCGTCCGAGTTGCGGGGTGACTCGGTGGGTCACTCGGGGGAAGGGGTTGGGAACAGGGAGAGCAGCGAGGTGCAGAGCTCGGCGAGCTTGACGAGGAAAAGGAAGACGCGGCGGAGGAAGGAGGTTTCCGGCGGAGGCGACGGTGGTGGCGGCGGCGAGGTGGCGCCGGAGAATGATGACCGGTTGGTGAAATCAGAGCCGTTGACGGGCGTGTTGGAGATGATCAAAGGACACGAACACAGCTCATTGTTCGAGCGCCGTCTCGAAAGCCAGGAATCGGATAGATACAAAAACATTGTGAGACAGCACGTGGATTTGGAAACAGTACAATTGAGACTCCAAAAGGGCTGCTATTCCTCCTGCACCAGCCCATTCTTCCGTGACCTCCTCCTCCTCTTCACCAATGCCACCGTCTTCTTCCCCGAAGACTCCACCGAATCAACTGCGGCTCAGAAGCTGCGCCGCCTTGTCATCGGGGAGATGAAGAACCACGGCCAAGCGCAATCTGACCTGACCCCACAGAAGACGGATTCACTCCCTCCAAACACACCACAAGCCAAACCAGATTCTCTCTTATCCAAGCACAAAGCCTCTGCTCCTATAGTGGTCTGCCGCAAACGCAGTTCAATGTCAGCCAAGCCTTACTCAGCGACCTTTGCCCAAAAGGGTGACCAACCCATCATCTATGACAAGAAGGAAAGGCCATCTTCTGATGCAAAACCACCCGTAAAACCCTCTTCTTCTGAGACAGACGAAGATGAACCTCCCAAGGCCAAGGAAAAGCCTGTGACCGGAGCTAGAAGCTTGAGAAGAAGCAACAAGAACCTCAGCAGCAATCCTGGCAATAAGAAACTCCCCACTAACTCCGCTCCAAAAGCAGGGTCCTCGGCGACCAAGCTGGCCGAGGCTGCGAAACCGGAGAAGAGCAAAGCAGAGGGAGGGCAGGACAAGAAGAGGAATGCAGCTGCGGATTTCTTGAAACGAATAAAGCGAAATGCTCCGGCAGAGGCGCTGAGGAGTGGTGGTGGTGGAGGAAGTAGTGGCAGCAGCAGGGGTGGTGGAGGTGGGGCTAGTGTGAAAGAGCAGAAGAAAATGGTAAATAGTGGAAAGGGTGATAAAGGGAAAGAAAGGACATCAAGGCATAGCGGTGGAGGAGGATCAGGGGCATGGGATAAAAGGAACAAGAACATTGAGAACAGCTCACAGTCGAAGAGGAGTGTTGGGAGGCCTCCAAAGAAGGCGGCAGAAAGCAATGCAGTTTCTGCAAAGCGTGGGAGGGAAAGTAGTGCTAGTGCTGGTAAGGATAAGCGACCTAAGAAACGTGCTAAGAAATGA 2253 0.5601 MVKPSSFLYRMENHQNHNPTQDPDLEKKQNHQHHHPQVWGTWEELLLACAVNRHGFKDWDTVAMEVQSRTTLPNLQATARHCEQKFHDLSRRFADQCNDAVQPHRQNGGAAGDNSDHVPWLDELRKLRVAELRREVQRYDVSILSLQSKVKKLEEEREKKNDGKVDEKPDLAVPGEPRPENDGTGREREVPEPAGSEPEIRRLDESTTNTDKLLPTTGDESDRENQSVNESNSTGSRFDGGKTGDGDGKVGLGTAPVHSGPKEPDPVGKKGKPVGEESNNGSYDTVVKVPTCESQPPSEERKSEGDSSELRGDSVGHSGEGVGNRESSEVQSSASLTRKRKTRRRKEVSGGGDGGGGGEVAPENDDRLVKSEPLTGVLEMIKGHEHSSLFERRLESQESDRYKNIVRQHVDLETVQLRLQKGCYSSCTSPFFRDLLLLFTNATVFFPEDSTESTAAQKLRRLVIGEMKNHGQAQSDLTPQKTDSLPPNTPQAKPDSLLSKHKASAPIVVCRKRSSMSAKPYSATFAQKGDQPIIYDKKERPSSDAKPPVKPSSSETDEDEPPKAKEKPVTGARSLRRSNKNLSSNPGNKKLPTNSAPKAGSSATKLAEAAKPEKSKAEGGQDKKRNAAADFLKRIKRNAPAEALRSGGGGGSSGSSRGGGGGASVKEQKKMVNSGKGDKGKERTSRHSGGGGSGAWDKRNKNIENSSQSKRSVGRPPKKAAESNAVSAKRGRESSASAGKDKRPKKRAKK* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0522 750 PANTHER BNAC04G22430D PROTEIN 22 750 - -
Dod10g0522 750 MobiDBLite consensus disorder prediction 519 750 - -
Dod10g0522 750 MobiDBLite consensus disorder prediction 471 495 - -
Dod10g0522 750 CDD Bromodomain 377 463 - -
Dod10g0522 750 MobiDBLite consensus disorder prediction 469 502 - -
Dod10g0522 750 SUPERFAMILY Bromodomain 373 472 IPR036427 GO:0005515
Dod10g0522 750 MobiDBLite consensus disorder prediction 13 36 - -
Dod10g0522 750 SMART sant 35 92 IPR001005 -
Dod10g0522 750 SMART bromo_6 139 472 IPR001487 GO:0005515
Dod10g0522 750 MobiDBLite consensus disorder prediction 153 208 - -
Dod10g0522 750 MobiDBLite consensus disorder prediction 532 573 - -
Dod10g0522 750 ProSiteProfiles Bromodomain profile. 382 453 IPR001487 GO:0005515
Dod10g0522 750 MobiDBLite consensus disorder prediction 17 33 - -
Dod10g0522 750 MobiDBLite consensus disorder prediction 699 713 - -
Dod10g0522 750 Pfam Myb-like DNA-binding domain 37 71 IPR001005 -
Dod10g0522 750 Pfam Bromodomain 377 457 IPR001487 GO:0005515
Dod10g0522 750 MobiDBLite consensus disorder prediction 278 292 - -
Dod10g0522 750 Coils Coil 129 163 - -
Dod10g0522 750 MobiDBLite consensus disorder prediction 574 601 - -
Dod10g0522 750 SUPERFAMILY Homeodomain-like 32 71 IPR009057 -
Dod10g0522 750 Gene3D - 362 477 IPR036427 GO:0005515
Dod10g0522 750 MobiDBLite consensus disorder prediction 609 640 - -
Dod10g0522 750 MobiDBLite consensus disorder prediction 671 686 - -
Dod10g0522 750 MobiDBLite consensus disorder prediction 153 368 - -
Dod10g0522 750 CDD SANT 39 70 IPR001005 -
Dod10g0522 750 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 22 750 - -
Dod10g0522 750 MobiDBLite consensus disorder prediction 295 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0522 Dod-Chr10 17220923 17226293 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod10g0522 Bromodomain 8.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0522 - - adu:107458545 1092.8