Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0515 ATGTGGAGATTTAAGCCATTTATGCACAAAGAGCCAGCTGGGCTTGAAGGCCGAGCTATAGATGTTGGCAATCTTAAGATAAATGTCCACAAGGCCATTGCTGAAGGAGGGTTCTCATGTGTTTACTTAGCACGTGATGCTGTACAGATGTCAAAGCAATATGCTTTGAAGCACATAATATGCAATGATGAAGAATCACTTGAATTAGTAAAGAAGGAGATATCTGTGATGAAGTCGCTGGTAGGACATCCCAATGTTGTCACACTTCATGCCCATGCAATCTTTGATATGGGTAGGACAAAAGAGGCATTTCTTGTGATGGAATTTTGTGAGAAGTCTCTGGTTAGTGTGCTGGAAAGCCGAGGAGCAGGTTATTTTGATGAAAACCAGGTTCTCTTAATCTTCAGGGATGTATGTAATGCAGTTTTTGCTATGCACTGCCAATCCCCACCTATTGCTCACCGAGACTTGAAAGCAGAGAATCTTTTATTAGGTTCAGATGGCTTATGGAAGTTGTGTGATTTTGGAAGCACTTCCACCAATCACAAATGTTTTGAAAAACCAGAAGAAATGGGAATTGAGGAAGACAATATCAGGAAGTACACAACCCCTGCCTACAGGGCTCCCGAGATGTGGGATTTGTTCCTGAGAGAAGTCATCAGTGAGAAAGTGGACGTATGGGCACTTGGGTGTCTCCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGGGAGTCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGATTTGCCCAAATATAGTTCATCAGTCACAGACTTAATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTTAATGAGCAGCTACCTATTAATTTGCAGAAGTCATTACCTGACAGGCCACCTGAGCTGCCCTCTTCCAGCAATCATGAAGGTGCTTCAATGCCCACAAATAAATCACATCCAGTGCCTCGTAGGAGTCCTCCTCCTCCGCCATCATCTATAGAACCCAAAACAACAACACAGCCATCCCTTGCTTCTAGGGGAGGGGGAAATGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCAGCATGCAAAGGATTCACTTGTCCCTGAGGAAAAGAGCAAACCCATATTTGATGAAGAACCATCTGATCACCATATCTCATTGAAACATGATAGAATTCGTCCTGACAATGATCAATTACCCAAAGATGTCAGTACTAACAAAGTGGTTAACAGACAAACTCATTCAGTAAAAAACAGTGCACCTGGAAAGTCACACAAGCCTGATACTGTATCTTCCAAGGACTTTGAAATAAACTTTTTTCAGGATAAAAGCCACACAAATGAGAGGCGAGTGTCAATCGCGGAGAATAGTGCTTCCTTTCAAGATCAGGCTTTTAACACTTTCGTTGCAGAATTCGATACTGCTAAGCTCAGTTCTGGACTTGGCAACAAATCTGAAAGGGTAGAAGCCTTAGAAGCTGAGGTGGAGAAACTGAAAGAGCAGCTGAGGGAAGCAAACTTGGAGAAAGCTGAAATCACTTCCAAGTTTGAAAAGCTTTCTGCTATCTGCCGATCGCAACGGCAAGAATTACAGGATCTCAAGCAGGCACTTGCAGCAAAAACTCCACCACCAAATAGGGAGGGTTCGAGAACCTCCCCTGGAGTTACTTCACCTGCTTCTAGGGAGAAGATTGGTGGGACAACTGAATGGAGAACTCCTGGTTCAGAACCAAAGTCATGGCAAGCATTTCCTGAGGAACCCCAACCTCAAAAGTCCCGTTCAGCTGACAGTTCTTCCAAGTCTGTCAGGACAAGAAATGGCCAGCAGAACCAGCAGAACAAGCAGCAACCTGCTCCACTAGCCGCTGATTTTGATACATGGGGTTTTGGGTCAGATAACTTCAGTGCTGTACGATCTGGCAGCCCGCAGATGCCAAGACCTGTTGAAGGGAGTAACTCTCAGGCTTTTGAGAACAAATCAACTACTCAACCTGCTGGATGGGCTGGTTTTTAA 2046 0.4457 MWRFKPFMHKEPAGLEGRAIDVGNLKINVHKAIAEGGFSCVYLARDAVQMSKQYALKHIICNDEESLELVKKEISVMKSLVGHPNVVTLHAHAIFDMGRTKEAFLVMEFCEKSLVSVLESRGAGYFDENQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNHKCFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVISEKVDVWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSVTDLIRDMLQARPDDRPDITQVWFRVNEQLPINLQKSLPDRPPELPSSSNHEGASMPTNKSHPVPRRSPPPPPSSIEPKTTTQPSLASRGGGNGGQLGAFWSTQHAKDSLVPEEKSKPIFDEEPSDHHISLKHDRIRPDNDQLPKDVSTNKVVNRQTHSVKNSAPGKSHKPDTVSSKDFEINFFQDKSHTNERRVSIAENSASFQDQAFNTFVAEFDTAKLSSGLGNKSERVEALEAEVEKLKEQLREANLEKAEITSKFEKLSAICRSQRQELQDLKQALAAKTPPPNREGSRTSPGVTSPASREKIGGTTEWRTPGSEPKSWQAFPEEPQPQKSRSADSSSKSVRTRNGQQNQQNKQQPAPLAADFDTWGFGSDNFSAVRSGSPQMPRPVEGSNSQAFENKSTTQPAGWAGF* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0515 681 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0515 681 MobiDBLite consensus disorder prediction 596 630 - -
Dod10g0515 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Dod10g0515 681 CDD STKc_GAK_like 26 298 - -
Dod10g0515 681 MobiDBLite consensus disorder prediction 385 411 - -
Dod10g0515 681 MobiDBLite consensus disorder prediction 412 437 - -
Dod10g0515 681 PANTHER NUMB-ASSOCIATED KINASE, ISOFORM A 1 672 - -
Dod10g0515 681 MobiDBLite consensus disorder prediction 556 574 - -
Dod10g0515 681 MobiDBLite consensus disorder prediction 309 324 - -
Dod10g0515 681 MobiDBLite consensus disorder prediction 544 681 - -
Dod10g0515 681 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0515 681 Coils Coil 492 547 - -
Dod10g0515 681 MobiDBLite consensus disorder prediction 301 366 - -
Dod10g0515 681 MobiDBLite consensus disorder prediction 385 444 - -
Dod10g0515 681 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0515 681 Gene3D Transferase(Phosphotransferase) domain 1 11 306 - -
Dod10g0515 681 MobiDBLite consensus disorder prediction 330 345 - -
Dod10g0515 681 MobiDBLite consensus disorder prediction 643 681 - -
Dod10g0515 681 SUPERFAMILY Protein kinase-like (PK-like) 29 339 IPR011009 -
Dod10g0515 681 PANTHER SERINE/THREONINE PROTEIN KINASE 1 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0515 Dod-Chr10 17090477 17095097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0515 26 306 CBL-interacting serine-threonine protein kinases AT5G10930 28.814 1.36e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Dod10g0515 Pkinase 6.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0515 K08853 - gmx:100808507 1042.34