Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0504 ATGAAGCGCCTGCTACACCAATTTATTCAAGACTACCTGATGCCTTCCCCTATCCCATCTTTGAGTGAAGCTAATCTCATTGAAGAAGTTGTCCAACGTGTGTTGACAAGGTTGAATCATATGCCTGAAGTTGGTTTAAAAGGCCTCGTTGGAATTGATAAAGCGATTGCAGATCTTCAGTCACTAATATTTTGCAACGGATCAGAACATGTTCGTGTTATAGGAATTTGGGGCATGGGTGGTATTGGTAAGACAACTCTCGCCGGTGCATTATACAATATAATGTGTTCTGAATTTGAAGGCTGTTGTTTCTTAGCAAATGTAAGAGAACAGTCAGAAAAATATGGAATAATTAAGTTAAGAGATAAGCTTCTATCCATATTATTAGAGGAAAAAGATATAAATATTGGTACTTATGGCGTACCAGCCCATTTTCTAAGGAGACTTGGCCGCAAAAAGATTCTTGTTGTTCTAGATGATGTCAATAATCCAGATGAAGTTACAAACTTAATTGGAGGACATGATTGGTTGGGTCCAGGAAGCAGAATCATTGTCACGACTAGAGATAAGCATGTGATTTGTAAAGCTGATGATGTATACGAAGTTGAGTTATTAGGATTTGAAGATGCTCTACAACTTCTGAATTTGCATGCCTTTAATGGAAGGTGCCCCCAAATGAATTGGCAAAATCTTATGCTCAAAGTGGTTGAATATGCTAAGGGCATCCCACTAGCTATTAAAGTTTTGGGTTCCTTTCTTTATGGCAAAAGTGCTAAAGAATGGGAAAGTCAATTGCAGAAGCTTCAGAAAATGCCATGTAAAGAAATTCAAAACGTTTTGAGATTGAGTTATGAAGGGTTAGATCGAGAAGAGAGGAGAATATTTTTATATATTGCTTGTTTCTTCTATGGATGTGCTTCGAAAGATTATGTAGAAATTTTACTTGATGTATGTGGTTATTCAACTTCTATTGCTTTGAGAAATCTTCAAGATAGAGCTCTTATAGAAGTTCTCAGAGACAAATATATATCTATGCATGACTTGATTCGACAAATGGGTTATGAAATTGTTCGTGGGCAAAATATTGAAAGGCCCGGGGAGAGAAGTCATTTATGGGATCCAAGTGACATCTATTATGTACTGAAGCACAATCAGAATCTAGCAAATCTGAAAAAGATTGAACTTGTGCAATCTGAATTGGTTGAGCTTCCAGATTTATCTAAAGCCTCAAGTCTTGAAGTCATAGATCTGCGTCATGGTCGAAATTTACTTTCCATTCATCCATCTATTTTCTGTCTCCAGCATCTTAAAGGGGTGTTTCTAGGATATTGTGAGAGGCTTGAGGAACTCCCAGGGATATAG 1362 0.3722 MKRLLHQFIQDYLMPSPIPSLSEANLIEEVVQRVLTRLNHMPEVGLKGLVGIDKAIADLQSLIFCNGSEHVRVIGIWGMGGIGKTTLAGALYNIMCSEFEGCCFLANVREQSEKYGIIKLRDKLLSILLEEKDINIGTYGVPAHFLRRLGRKKILVVLDDVNNPDEVTNLIGGHDWLGPGSRIIVTTRDKHVICKADDVYEVELLGFEDALQLLNLHAFNGRCPQMNWQNLMLKVVEYAKGIPLAIKVLGSFLYGKSAKEWESQLQKLQKMPCKEIQNVLRLSYEGLDREERRIFLYIACFFYGCASKDYVEILLDVCGYSTSIALRNLQDRALIEVLRDKYISMHDLIRQMGYEIVRGQNIERPGERSHLWDPSDIYYVLKHNQNLANLKKIELVQSELVELPDLSKASSLEVIDLRHGRNLLSIHPSIFCLQHLKGVFLGYCERLEELPGI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0504 453 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 390 - -
Dod10g0504 453 Gene3D Ribonuclease Inhibitor 368 453 IPR032675 -
Dod10g0504 453 Gene3D - 26 202 IPR027417 -
Dod10g0504 453 Gene3D - 205 288 IPR042197 -
Dod10g0504 453 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 393 450 IPR044974 GO:0006952
Dod10g0504 453 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 390 IPR044974 GO:0006952
Dod10g0504 453 SUPERFAMILY "Winged helix" DNA-binding domain 274 382 IPR036390 -
Dod10g0504 453 Pfam NB-ARC domain 68 284 IPR002182 GO:0043531
Dod10g0504 453 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 393 450 - -
Dod10g0504 453 SUPERFAMILY L domain-like 345 451 - -
Dod10g0504 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 298 IPR027417 -
Dod10g0504 453 PRINTS Disease resistance protein signature 73 88 - -
Dod10g0504 453 PRINTS Disease resistance protein signature 407 423 - -
Dod10g0504 453 PRINTS Disease resistance protein signature 148 162 - -
Dod10g0504 453 PRINTS Disease resistance protein signature 239 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0504 Dod-Chr10 16805439 16813107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0504 22 395 WRKY Transcription Factor Family AT4G12020 35.864 3.56e-59 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0504 - - ahf:112730190 539.265