Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0502 ATGGAAATACAATCCAGTCTTTACCATCCAAACATACTACGTCTATATGGTTGGTTTCATGATGAGGAGCGTGTTTTCTTGATTCGTGAATATGCTCACTATGGTGAGCTTTACAAGGAGCTTAGAAAAAGAGGCCACCTCACTGAGAAACAAGCAACCACGTATATTTTGAGCCTCACAAAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCATAGGGATATAAAGCTGGAAAATCTATTGCTTGACCATGAGGCCTTTTGGAAATGGCAATTGGTATCTCACTCTATAGAAAGAGCTCATTCATGGATTAAATGTTATTTCTCCATTTCCTTTGACACCTTCAATTTGGACTGGGGAAATGCTTGA 372 0.3898 MEIQSSLYHPNILRLYGWFHDEERVFLIREYAHYGELYKELRKRGHLTEKQATTYILSLTKALAYCHEKHVIHRDIKLENLLLDHEAFWKWQLVSHSIERAHSWIKCYFSISFDTFNLDWGNA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0502 123 Gene3D Transferase(Phosphotransferase) domain 1 1 93 - -
Dod10g0502 123 Pfam Protein kinase domain 2 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0502 123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 71 83 IPR008271 GO:0004672|GO:0006468
Dod10g0502 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0502 123 SUPERFAMILY Protein kinase-like (PK-like) 2 87 IPR011009 -
Dod10g0502 123 SMART serkin_6 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0502 123 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 86 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0502 Dod-Chr10 16781940 16791114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0502 1 84 CBL-interacting serine-threonine protein kinases AT5G35410 39.286 7.96e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Dod10g0502 Pkinase 4.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0502 K08850 - gmx:100800111 159.844