LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod10g0501	ATGGAAGAAGAAAACACGAAGCGAAAATGGTCCCTCGAAGATTTTAAGATCGGGAAACGTCTCAGGAAAGGGAAATTCGGCAGAGTCTACGTTGCCAGAGAAATCAAGAGCAAGTATGTGGTTGCATTGAAGATTATATTCAAGCAATAG	150	0.4133	MEEENTKRKWSLEDFKIGKRLRKGKFGRVYVAREIKSKYVVALKIIFKQ*	50

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod10g0501	49	ProSiteProfiles	Protein kinase domain profile.	15	49	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod10g0501	49	PANTHER	AURORA KINASE A	3	49	-	-
	Dod10g0501	49	Gene3D	Phosphorylase Kinase; domain 1	3	49	-	-
	Dod10g0501	49	SUPERFAMILY	Protein kinase-like (PK-like)	7	48	IPR011009	-
	Dod10g0501	49	PANTHER	SERINE/THREONINE-PROTEIN KINASE IAL-RELATED	3	49	IPR030616	GO:0004672

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod10g0501	Dod-Chr10	16781023	16781900	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod10g0501	12	49	CBL-interacting serine-threonine protein kinases	AT4G14580	47.368	8.46e-06	38.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod10g0501	K08850		-	gmx:100800111	82.8037

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