Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0485 ATGGCATTTTGGGGAGTGGAAGTGAAGCCCGGAAAGCCCTTCGCTCATGAATATGACGGCTCCAAAGGACGCCTCCATATTTCCATGGCTACTTTGGGCTTTGGTAGTGCAACGGCAAGAAGCACACTGCAGTGTAATGTAGGAGACAGGAGCCCTGTGTATCTGTGCTCTCTCTATCCTGGAACCACTGAGTCCTTGCAGTTGAATTTGGAGTTTGAGGAAGTTGATAAAGTCATTTTCACCGTTATTGGTCCTCGCAGCATTCATCTGTGTGGTTACTATCTTGGCAGAGGCACTTCTCGCAATGCCAATGTCAATGACGATTCAGAATCATATGGGGAAGATATTGCGGATACAGAGACAGAGAGATCTGATTATAGTGATGAAGATGAGTATGAGGGTAGTTTTATTGATGATGATGCTCATCCAGAGGTTTTCCCACCGTCTCCTATTTCCAGTGAAGAGAAAGCTTCTCATGATAACAGAACGAAAGGTAGGAAAAGCAGCCTTCGGCGGCTTAGGAGGAAGTACCAATCAGTAGAGTCAGATGATGATGGCGATTTTGAGGAAAAGATAATTGTCAATGACAATATGCATGACCAAACAACAGGAATTGATAATGAAGATAGCCTGCCAATTTCATCTATTTACAAGAATAATGCCGCTCAAAGGACCTTGGACAAGGAAATGAATGATAGGGGTGACAGAGGAGCCAGCGATGCAAGCAACAAGAATGGTGAAGATGGTGGCAATAGTATTATTGAAACAGATTTAGCAACAGGCAATGTCCTCATAGATAGTCAGACACATAGGGAAGCTGCATTGGCAGGCCACTTAGTAGATCCTTGCACTGTTCTGGATGGTGAGGATATTAAAACATTAAAAATGAAAAAGAAGAGAAAGGGAAAAGAAATCAAGAGTTCTGTCAATGGGCATTGTATGAAGCTAGAGAACACTGTGCAAGATGACCCTAAAATGGACAAGATGACCGTGGATCTTCGGGCAGGAAATGAACAAAACCCGGAGCATGATGATGATAAGGAAACTGAAACCATGGATAAAATACTGCCTTCCTCTGAAGTTGGTTATAGACAAGGTGGAAAACCAAAGAAAAAAAGGAAAGAACGGTCAAAGGAGGGAATAGTTTTGACTGCCAATGGGGCTTATGATAGCAATCTTGTTAATATGCCTCAGAGAAATGAACACAATAAACAGCCCACAGTTAATGGTAGGGATGTTGAGATTGCAGAAAATGTTGCATTGCCTGCTGCTGAAAAGGATTCTGAAAAAGGCAGAACAAAGAGGAGAAAGAAAGAACAGGTAAACAGAGGTTCACATGTTGAAGGTGACATTGGATACCGTGAAGATATTGCTGAAGATTACAAAGCTAACAGGGATAAAGCAGATTCAAATAATCTGATTCATAATTTTTCTGAAGTAAAAGAGCAACACCAGAAGCTAGCAAATGAAAAGAGTGTGGATAATGGTGCACATGACTTTCCTGATGGAAATCAAAATGAGGGAAAAGTCAAGAAACGGAAGAAAAAGAGTAAAGTTCAGGGGAATACTGAAGTAAATTCTGAGTTGCCTTTATCTGTTGAGCAAAGTAGTGAGATGGAGAAGGATGATGTAAACAAGAATACTAATGCAAAGCATTCGCAAGTTAGAACATTGTCAAGTGGACTTCTTATTCAAGAGCTAGAAATAGGGAAAAAAGATGGCAAGGTTGCTGCATCGGGGAAAAAGATCAGCGTTCATTACACTGGCAAGTTGAAGGAAGATGGAGAAGTATTTGAGTCAAATTTTGGCCAAGCTCCTTTCAAATTTCGTCTTGGTAAAGGAGAAGTTATTGAGGGTTGGGATGTTGGCCTTGAAGGCATGCGAGTTGGAGAAAAGAGAAGACTTGTTATCCCGCCATCAATGACGTCTAAGAATGAAGAATGCAGTGAAACAGTACCACCCAATTCATGGCTGGTTTATGACTTTGAACTGGTTAAGGTTCATTGA 2007 0.4136 MAFWGVEVKPGKPFAHEYDGSKGRLHISMATLGFGSATARSTLQCNVGDRSPVYLCSLYPGTTESLQLNLEFEEVDKVIFTVIGPRSIHLCGYYLGRGTSRNANVNDDSESYGEDIADTETERSDYSDEDEYEGSFIDDDAHPEVFPPSPISSEEKASHDNRTKGRKSSLRRLRRKYQSVESDDDGDFEEKIIVNDNMHDQTTGIDNEDSLPISSIYKNNAAQRTLDKEMNDRGDRGASDASNKNGEDGGNSIIETDLATGNVLIDSQTHREAALAGHLVDPCTVLDGEDIKTLKMKKKRKGKEIKSSVNGHCMKLENTVQDDPKMDKMTVDLRAGNEQNPEHDDDKETETMDKILPSSEVGYRQGGKPKKKRKERSKEGIVLTANGAYDSNLVNMPQRNEHNKQPTVNGRDVEIAENVALPAAEKDSEKGRTKRRKKEQVNRGSHVEGDIGYREDIAEDYKANRDKADSNNLIHNFSEVKEQHQKLANEKSVDNGAHDFPDGNQNEGKVKKRKKKSKVQGNTEVNSELPLSVEQSSEMEKDDVNKNTNAKHSQVRTLSSGLLIQELEIGKKDGKVAASGKKISVHYTGKLKEDGEVFESNFGQAPFKFRLGKGEVIEGWDVGLEGMRVGEKRRLVIPPSMTSKNEECSETVPPNSWLVYDFELVKVH* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0485 668 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 269 - -
Dod10g0485 668 Coils Coil 668 668 - -
Dod10g0485 668 MobiDBLite consensus disorder prediction 535 549 - -
Dod10g0485 668 MobiDBLite consensus disorder prediction 334 380 - -
Dod10g0485 668 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 580 668 IPR001179 GO:0003755
Dod10g0485 668 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Dod10g0485 668 MobiDBLite consensus disorder prediction 111 137 - -
Dod10g0485 668 MobiDBLite consensus disorder prediction 482 553 - -
Dod10g0485 668 Gene3D Nucleoplasmin core domain 1 98 - -
Dod10g0485 668 MobiDBLite consensus disorder prediction 423 450 - -
Dod10g0485 668 PANTHER PEPTIDYLPROLYL ISOMERASE 1 269 - -
Dod10g0485 668 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 409 668 - -
Dod10g0485 668 MobiDBLite consensus disorder prediction 421 450 - -
Dod10g0485 668 MobiDBLite consensus disorder prediction 334 354 - -
Dod10g0485 668 MobiDBLite consensus disorder prediction 482 497 - -
Dod10g0485 668 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 575 665 IPR001179 GO:0003755
Dod10g0485 668 Gene3D - 531 668 IPR046357 GO:0003755
Dod10g0485 668 MobiDBLite consensus disorder prediction 225 242 - -
Dod10g0485 668 MobiDBLite consensus disorder prediction 102 185 - -
Dod10g0485 668 PANTHER PEPTIDYLPROLYL ISOMERASE 409 668 - -
Dod10g0485 668 SUPERFAMILY FKBP-like 542 667 - -
Dod10g0485 668 MobiDBLite consensus disorder prediction 224 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0485 Dod-Chr10 16436636 16442228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0485 565 665 Calmodulin-binding Proteins AT5G48570 38.938 2.88e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0485 K14826 - gmx:100798135 664.455