Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0471 ATGATAAGGAAATGTTCAGCAAATTCAGTGAGGGTACTTGTTATAGATTTTGGTATACTTTATGGTTTGCAATGGCCCACTTTTATACAGCGAATTTCATGGAGAGCAGGTGGACCACCAAAGGTTCGGATTACAGGAATAGATTTCCTGCAACCTGGTTTTCGGCCTGCAGAGAGAGTTATAGAAACAGGTCGTCGCTTGGAAGCTTATGCTGAAACCTTTAAGGTTCCATTTGAGTATAATGCCATAGCAAAGAAATGGGAAACAATTCAACTTGAGGAACTCAAGATCGATAGGGACGGGTTTTCCTTGTTGTTACCTGTTTTTATAGAGGTAAGAACTTGCTGGATGAATCTGTGGTAG 363 0.4077 MIRKCSANSVRVLVIDFGILYGLQWPTFIQRISWRAGGPPKVRITGIDFLQPGFRPAERVIETGRRLEAYAETFKVPFEYNAIAKKWETIQLEELKIDRDGFSLLLPVFIEVRTCWMNLW* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0471 120 Pfam GRAS domain family 5 99 IPR005202 -
Dod10g0471 120 PANTHER SCARECROW-LIKE PROTEIN 9 2 103 - -
Dod10g0471 120 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 103 IPR005202 -
Dod10g0471 120 ProSiteProfiles GRAS family profile. 1 120 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0471 Dod-Chr10 15991738 15992100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0471 2 105 GRAS Transcription Factor Family AT2G37650 67.308 2.84e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod10g0471 GRAS 6.8e-26 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0471 - - gmx:100780785 173.711