Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0465 ATGGCTCAGAAAACAGAGAAGAAAGAAGAGACAGAGTTCAAGGTCCCCGAAACCATCCCCACCAAAACCATCGTCGACCCCTGCGTCAACAACTGCGGCCTCACCGCCACCGCCGCCAACAACATGTGCCCGAATTGCTTCGCCGCAGCAACCACCTCCTTCTCCGCCGGAACCTCGCCTCAGCCTTCCAGATCCGCCCACCCAAGGAAGCGGCCGTTCCCGGAGGAGGAAAATCCTTCGGTGGCTGCTGCTGCTGCGGCGCGTGAGGATCTTTCACCGCAGCACGTCGAGGCTGCGCCGTCGGAGGCGAAGCGAGCGGTGAACCGGTGCTCCGGGTGCCGGCGGCGTGTCGGACTGACAGGGTTCCGGTGCCGGTGTGGCGAGCTGTTCTGCGCGGAGCACCGTTACTCCGACCGCCATGACTGCAGCTTCGATTATAAGGCCGCCGGGAGGGAAGCTATCGCCAGAGAGAATCCGGTGATCCGTGCCCCGAAGATCGTCAAGGTCTGA 510 0.6294 MAQKTEKKEETEFKVPETIPTKTIVDPCVNNCGLTATAANNMCPNCFAAATTSFSAGTSPQPSRSAHPRKRPFPEEENPSVAAAAAAREDLSPQHVEAAPSEAKRAVNRCSGCRRRVGLTGFRCRCGELFCAEHRYSDRHDCSFDYKAAGREAIARENPVIRAPKIVKV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0465 169 MobiDBLite consensus disorder prediction 56 93 - -
Dod10g0465 169 SMART AN1_Zf_4 110 147 IPR000058 GO:0008270
Dod10g0465 169 Gene3D - 81 164 IPR035896 -
Dod10g0465 169 SUPERFAMILY AN1-like Zinc finger 93 164 IPR035896 -
Dod10g0465 169 ProSiteProfiles Zinc finger AN1-type profile. 104 150 IPR000058 GO:0008270
Dod10g0465 169 Pfam AN1-like Zinc finger 110 147 IPR000058 GO:0008270
Dod10g0465 169 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 169 - -
Dod10g0465 169 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0465 Dod-Chr10 15816197 15817231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0465 28 169 C2H2 Transcription Factor Family AT3G52800 36.943 7.37e-27 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0465 - - pvu:PHAVU_005G036400g 197.208