Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0454 ATGGTGAGGGTTGATGAATTTCTAATGCCTTGGGTTAGAGAGGATCAGACACAAACCCGAGGTGCAACCTCTGAATCAATTGATGCTTTGCCAACTTACAAGTTCAAGATGAAGAAAAACAAAAGCAGGGGTGAAAGTAACTCAGACCATTGCATTTCCTTCTCCTGGTACCAGGATATTGATCATCTTTATGTGTATACTGGCCTTGACTGTGACGTTGTTGGTAAATTCTATGGTTGTGTGCAGGTTTGCTGCATCTGCTTGGCCAAGTATGAAAACAATGATGAGCTGAGAGAATTGCCTTGTTCTCATCTTTTCCACAAAGAATGCGTGGATAAGTGGTTGAAGATTAATGCATTATGTCCTCTTTGTAAGAGTGAGGTTGGTGAGAATGTAACAGGATTAGTATCTGGGGAGGATGCAAACCAACAAAGGAGTGAAAGCAGAGTTGAGAATGGCCACGCCAATGCCTAA 474 0.4219 MVRVDEFLMPWVREDQTQTRGATSESIDALPTYKFKMKKNKSRGESNSDHCISFSWYQDIDHLYVYTGLDCDVVGKFYGCVQVCCICLAKYENNDELRELPCSHLFHKECVDKWLKINALCPLCKSEVGENVTGLVSGEDANQQRSESRVENGHANA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0454 157 MobiDBLite consensus disorder prediction 137 157 - -
Dod10g0454 157 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 12 149 - -
Dod10g0454 157 SMART ring_2 84 124 IPR001841 -
Dod10g0454 157 Pfam Ring finger domain 83 125 IPR001841 -
Dod10g0454 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 133 IPR013083 -
Dod10g0454 157 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 12 149 - -
Dod10g0454 157 SUPERFAMILY RING/U-box 60 131 - -
Dod10g0454 157 ProSiteProfiles Zinc finger RING-type profile. 84 125 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0454 Dod-Chr10 15059924 15061995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0454 13 131 C3H Transcription Factor Family AT1G80400 47.899 5.68e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0454 - - gmx:100778728 189.119