LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod10g0451	ATGGCATTGTGTGGCCGAGTCAGATCCGGGATCTCAGTCTTCAACAAATTAGGGTTCCTCAATTCCCAGAGATCCACTCTCCAACGATCCCTGATTGCCCCTTCCAATCCCCTGGCCTCCAGAAATTATGCGAATGTGCCGGGGCAAAAGGAAGACAAAGTTAAGGTCCCTCTGGCTATGTTTGGGGGTACAGGAAACTATGCCTCTGCTTTGTATATTGCAGCAGTGAAAGTTAATGCAGTGGAAAAGGTTGAATATGAGATTCTTGAATTTGTTGAGGCGGTAAAGAATAGTGCTACATTTTCACAGTTTATAAGGGACTTGTCTGTGAAGAAAGATGTCAGAGTAAAGGCAATCCAGGAGATTACTGGTGAAGCTAAGTTCTCTGATGTTACAAAGAACTTCCTTGTTACTGTTGCTGAGAATGGGAGGCTTAACAACATTGACAGTATTGCAAAGAGGTATAAGGAGTTGGCAATGGCATACAAGGGAGAAGTGAAAGCCACTGTGACCACGGTCATTCCTCTTCCCCCTGAAGAAGAGAAGGCACTGAAGGAGACTCTTCAGGAGATCCTAGGTACTGGGGCAAAGGTTCATCTTGATCAGAAGATTGATCCAAGCATACTTGGTGGTATAGTGGTGGAGTTTAGCCAGAAGGTGTTTGACATGTCTATTAAGAGTAGGGCACAACAGATGGAGAGGATCCTCCGAGAGCCCATAAATATTTCCAACATCTAG	738	0.4485	MALCGRVRSGISVFNKLGFLNSQRSTLQRSLIAPSNPLASRNYANVPGQKEDKVKVPLAMFGGTGNYASALYIAAVKVNAVEKVEYEILEFVEAVKNSATFSQFIRDLSVKKDVRVKAIQEITGEAKFSDVTKNFLVTVAENGRLNNIDSIAKRYKELAMAYKGEVKATVTTVIPLPPEEEKALKETLQEILGTGAKVHLDQKIDPSILGGIVVEFSQKVFDMSIKSRAQQMERILREPINISNI*	246

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod10g0451	245	PANTHER	ATP SYNTHASE DELTA CHAIN	34	238	IPR000711	GO:0015986\|GO:0046933
	Dod10g0451	245	ProSitePatterns	ATP synthase delta (OSCP) subunit signature.	198	217	IPR020781	GO:0015986\|GO:0016020\|GO:0046933
	Dod10g0451	245	PRINTS	ATP synthase delta subunit signature	211	229	IPR000711	GO:0015986\|GO:0046933
	Dod10g0451	245	PRINTS	ATP synthase delta subunit signature	144	158	IPR000711	GO:0015986\|GO:0046933
	Dod10g0451	245	PRINTS	ATP synthase delta subunit signature	196	211	IPR000711	GO:0015986\|GO:0046933
	Dod10g0451	245	PRINTS	ATP synthase delta subunit signature	63	82	IPR000711	GO:0015986\|GO:0046933
	Dod10g0451	245	PRINTS	ATP synthase delta subunit signature	133	144	IPR000711	GO:0015986\|GO:0046933
	Dod10g0451	245	TIGRFAM	ATP_synt_delta: ATP synthase F1, delta subunit	66	236	IPR000711	GO:0015986\|GO:0046933
	Dod10g0451	245	PANTHER	ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL	34	238	-	-
	Dod10g0451	245	Pfam	ATP synthase delta (OSCP) subunit	65	236	IPR000711	GO:0015986\|GO:0046933

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod10g0451	103	245	Primary Pumps ATPases	AT5G13450	57.343	2.55e-58	181

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod10g0451	K02137		-	gmx:100790990	385.956

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